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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182753710
OJRD01000033
235097
Bacteroidota
TTT
Lys
>WENV182753990
OJRD01000573
235097
Bacteroidota
TTT
Lys
>WENV182754312
OJRD01005618
235102
Bacteroidota
CGT
Thr
>WENV182753982
OJRD01000561
243025
Bacteroidota
CAT
Met
>WENV182754650
OJRD01050353
153993
Bacteroidota
GAT
Ile
>WENV182754221
OJRD01002915
58715
Bacteroidota
GAG
Leu
>WENV182754216
OJRD01002791
338486
Bacteroidota
CAT
Met
>WENV182753659
OJRD01000004
415410
Bacteroidota
TTG
Gln
>WENV182753861
OJRD01000196
344692
Bacteroidota
GGT
Thr
>WENV182753875
OJRD01000246
341950
Bacteroidota
>WENV182753915
OJRD01000326
338124
Bacteroidota
CCG
Arg
>WENV182754237
OJRD01003220
238121
Bacteroidota
CTT
Lys
>WENV182753661
OJRD01000006
126641
Bacteroidota
TAC
Val
>WENV182753737
OJRD01000050
338132
Bacteroidota
GCA
Cys
>WENV182753787
OJRD01000098
338132
Bacteroidota
GCA
Cys
>WENV182754331
OJRD01006613
338132
Bacteroidota
GCA
Cys
>WENV182754243
OJRD01003239
235165
Bacteroidota
CCA
Trp
>WENV182753665
OJRD01000008
280660
Bacteroidota
CCA
Trp
>WENV182754092
OJRD01001308
144933
Bacteroidota
TCT
Arg
>WENV182754040
OJRD01000822
144656
Bacteroidota
GTG
His
>WENV182753918
OJRD01000331
235207
Bacteroidota
CAT
Met
>WENV182754128
OJRD01001559
144596
Bacteroidota
GGC
Ala
>WENV182753868
OJRD01000226
80607
Bacteroidota
GTA
Tyr
>WENV182753914
OJRD01000323
80607
Bacteroidota
GTA
Tyr
>WENV182754093
OJRD01001321
95559
Bacteroidota
TAG
Leu
>WENV182753891
OJRD01000274
419272
Bacteroidota
CTG
Gln
>WENV182753991
OJRD01000579
144655
Bacteroidota
GGC
Ala
>WENV182754507
OJRD01022580
263771
Bacteroidota
CTT
Lys
>WENV182754202
OJRD01002605
95875
Bacteroidota
TAG
Leu
>WENV182754194
OJRD01002460
240012
Bacteroidota
CCC
Gly
>WENV182753751
OJRD01000059
44852
Bacteroidota
TAA
Leu
>WENV182754460
OJRD01016712
147439
Bacteroidota
TCT
Arg
>WENV182754297
OJRD01004944
150485
Bacteroidota
GTT
Asn
>WENV182753832
OJRD01000145
50727
Bacteroidota
TGA
Ser
>WENV182753943
OJRD01000420
50727
Bacteroidota
TGA
Ser
>WENV182754070
OJRD01001130
50727
Bacteroidota
TGA
Ser
>WENV182754215
OJRD01002744
50727
Bacteroidota
TGA
Ser
>WENV182754004
OJRD01000610
132360
Bacteroidota
GGG
Pro
>WENV182754301
OJRD01005028
132360
Bacteroidota
GGG
Pro
>WENV182753713
OJRD01000039
239647
Bacteroidota
TTT
Lys
>WENV182753671
OJRD01000011
353927
Bacteroidota
TTC
Glu
>WENV182753748
OJRD01000056
16224
Bacteroidota
GGA
Ser
>WENV182753951
OJRD01000444
151960
Bacteroidota
GGC
Ala
>WENV182754074
OJRD01001164
16220
Bacteroidota
GGA
Ser
>WENV182753939
OJRD01000404
338125
Bacteroidota
CCT
Arg
>WENV182754058
OJRD01001020
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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