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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182762686
OJRO01000017
235102
Bacteroidota
CGT
Thr
>WENV182762670
OJRO01000013
144657
Bacteroidota
CGG
Pro
>WENV182763143
OJRO01001146
243025
Bacteroidota
CAT
Met
>WENV182762687
OJRO01000018
343138
Bacteroidota
CCT
Arg
>WENV182762734
OJRO01000035
58715
Bacteroidota
GAG
Leu
>WENV182763270
OJRO01002710
46165
Bacteroidota
TGA
Ser
>WENV182762926
OJRO01000275
17323
Bacteroidota
GGA
Ser
>WENV182762679
OJRO01000014
338486
Bacteroidota
CAT
Met
>WENV182762807
OJRO01000088
338486
Bacteroidota
CAT
Met
>WENV182762857
OJRO01000134
338486
Bacteroidota
CAT
Met
>WENV182762754
OJRO01000044
48053
Bacteroidota
TGA
Ser
>WENV182762758
OJRO01000050
48053
Bacteroidota
TGA
Ser
>WENV182762821
OJRO01000094
48053
Bacteroidota
TGA
Ser
>WENV182762871
OJRO01000164
48053
Bacteroidota
TGA
Ser
>WENV182763147
OJRO01001171
48053
Bacteroidota
TGA
Ser
>WENV182763219
OJRO01001861
415410
Bacteroidota
TTG
Gln
>WENV182763238
OJRO01002089
415410
Bacteroidota
TTG
Gln
>WENV182762675
OJRO01000013
59689
Bacteroidota
CAG
Leu
>WENV182763145
OJRO01001154
344692
Bacteroidota
GGT
Thr
>WENV182763129
OJRO01001019
145504
Bacteroidota
TGT
Thr
>WENV182763306
OJRO01003573
341950
Bacteroidota
>WENV182762703
OJRO01000025
338124
Bacteroidota
CCG
Arg
>WENV182762983
OJRO01000402
338124
Bacteroidota
CCG
Arg
>WENV182763090
OJRO01000766
168744
Bacteroidota
GTG
His
>WENV182763116
OJRO01000948
238121
Bacteroidota
CTT
Lys
>WENV182762998
OJRO01000417
126641
Bacteroidota
TAC
Val
>WENV182762930
OJRO01000281
338132
Bacteroidota
GCA
Cys
>WENV182762940
OJRO01000303
338132
Bacteroidota
GCA
Cys
>WENV182762974
OJRO01000380
338132
Bacteroidota
GCA
Cys
>WENV182763006
OJRO01000431
338132
Bacteroidota
GCA
Cys
>WENV182763119
OJRO01000972
338132
Bacteroidota
GCA
Cys
>WENV182763190
OJRO01001502
338132
Bacteroidota
GCA
Cys
>WENV182762829
OJRO01000096
58714
Bacteroidota
CAA
Leu
>WENV182763168
OJRO01001266
235165
Bacteroidota
CCA
Trp
>WENV182762842
OJRO01000115
144933
Bacteroidota
TCT
Arg
>WENV182763098
OJRO01000795
144933
Bacteroidota
TCT
Arg
>WENV182763011
OJRO01000440
149691
Bacteroidota
GTT
Asn
>WENV182763302
OJRO01003408
149691
Bacteroidota
GTT
Asn
>WENV182762822
OJRO01000094
144656
Bacteroidota
GTG
His
>WENV182762980
OJRO01000387
235207
Bacteroidota
CAT
Met
>WENV182763075
OJRO01000664
235207
Bacteroidota
CAT
Met
>WENV182762894
OJRO01000207
144659
Bacteroidota
GTG
His
>WENV182762671
OJRO01000013
235180
Bacteroidota
CCA
Trp
>WENV182763133
OJRO01001065
235180
Bacteroidota
CCA
Trp
>WENV182763635
OJRO01037168
144596
Bacteroidota
GGC
Ala
>WENV182762923
OJRO01000274
80607
Bacteroidota
GTA
Tyr
>WENV182762982
OJRO01000392
80607
Bacteroidota
GTA
Tyr
>WENV182762892
OJRO01000200
80614
Bacteroidota
>WENV182763169
OJRO01001266
154643
Bacteroidota
CAT
Met
>WENV182763234
OJRO01002027
419272
Bacteroidota
CTG
Gln
>WENV182763227
OJRO01001949
144639
Bacteroidota
GGC
Ala
>WENV182762688
OJRO01000018
338164
Bacteroidota
TTC
Glu
>WENV182763103
OJRO01000835
95875
Bacteroidota
TAG
Leu
>WENV182762861
OJRO01000141
240012
Bacteroidota
CCC
Gly
>WENV182762948
OJRO01000341
240012
Bacteroidota
CCC
Gly
>WENV182762837
OJRO01000104
44852
Bacteroidota
TAA
Leu
>WENV182762943
OJRO01000307
44852
Bacteroidota
TAA
Leu
>WENV182763078
OJRO01000677
147439
Bacteroidota
TCT
Arg
>WENV182762764
OJRO01000053
150485
Bacteroidota
GTT
Asn
>WENV182762876
OJRO01000173
411550
Bacteroidota
CTG
Gln
>WENV182763138
OJRO01001097
239647
Bacteroidota
TTT
Lys
>WENV182762875
OJRO01000172
353927
Bacteroidota
TTC
Glu
>WENV182763648
OJRO01040944
146530
Bacteroidota
TGT
Thr
>WENV182762976
OJRO01000380
23696
Bacteroidota
GCT
Ser
>WENV182763237
OJRO01002087
414426
Bacteroidota
CTG
Gln
>WENV182763208
OJRO01001677
16224
Bacteroidota
GGA
Ser
>WENV182763389
OJRO01007219
151960
Bacteroidota
GGC
Ala
>WENV182763376
OJRO01006735
16220
Bacteroidota
GGA
Ser
>WENV182762996
OJRO01000414
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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