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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182764760
OJRQ01000065
235097
Bacteroidota
TTT
Lys
>WENV182764763
OJRQ01000068
235097
Bacteroidota
TTT
Lys
>WENV182764841
OJRQ01000147
235097
Bacteroidota
TTT
Lys
>WENV182765048
OJRQ01000848
235097
Bacteroidota
TTT
Lys
>WENV182764737
OJRQ01000049
235102
Bacteroidota
CGT
Thr
>WENV182764757
OJRQ01000064
144657
Bacteroidota
CGG
Pro
>WENV182764622
OJRQ01000003
338155
Bacteroidota
CTC
Glu
>WENV182764828
OJRQ01000134
338155
Bacteroidota
CTC
Glu
>WENV182765036
OJRQ01000754
338155
Bacteroidota
CTC
Glu
>WENV182764625
OJRQ01000003
339341
Bacteroidota
GGT
Thr
>WENV182764721
OJRQ01000034
343138
Bacteroidota
CCT
Arg
>WENV182764615
OJRQ01000001
58715
Bacteroidota
GAG
Leu
>WENV182764674
OJRQ01000016
46165
Bacteroidota
TGA
Ser
>WENV182764620
OJRQ01000002
17323
Bacteroidota
GGA
Ser
>WENV182764726
OJRQ01000039
235817
Bacteroidota
GAA
Phe
>WENV182764730
OJRQ01000041
338486
Bacteroidota
CAT
Met
>WENV182764826
OJRQ01000133
338486
Bacteroidota
CAT
Met
>WENV182764733
OJRQ01000044
415410
Bacteroidota
TTG
Gln
>WENV182764885
OJRQ01000233
415410
Bacteroidota
TTG
Gln
>WENV182765089
OJRQ01001495
415410
Bacteroidota
TTG
Gln
>WENV182764918
OJRQ01000285
411543
Bacteroidota
CTG
Gln
>WENV182764614
OJRQ01000001
59689
Bacteroidota
CAG
Leu
>WENV182764754
OJRQ01000064
59689
Bacteroidota
CAG
Leu
>WENV182764646
OJRQ01000009
80835
Bacteroidota
GTA
Tyr
>WENV182764741
OJRQ01000052
80835
Bacteroidota
GTA
Tyr
>WENV182764745
OJRQ01000054
80835
Bacteroidota
GTA
Tyr
>WENV182764689
OJRQ01000023
128251
Bacteroidota
TGG
Pro
>WENV182765175
OJRQ01006560
237247
Bacteroidota
TTT
Lys
>WENV182764732
OJRQ01000043
344692
Bacteroidota
GGT
Thr
>WENV182765038
OJRQ01000758
341950
Bacteroidota
>WENV182764996
OJRQ01000499
338124
Bacteroidota
CCG
Arg
>WENV182764612
OJRQ01000001
235203
Bacteroidota
TTT
Lys
>WENV182764677
OJRQ01000018
235203
Bacteroidota
TTT
Lys
>WENV182764671
OJRQ01000016
238121
Bacteroidota
CTT
Lys
>WENV182764672
OJRQ01000016
238121
Bacteroidota
CTT
Lys
>WENV182764659
OJRQ01000011
338132
Bacteroidota
GCA
Cys
>WENV182764694
OJRQ01000025
338132
Bacteroidota
GCA
Cys
>WENV182764899
OJRQ01000259
338132
Bacteroidota
GCA
Cys
>WENV182764956
OJRQ01000384
338132
Bacteroidota
GCA
Cys
>WENV182764673
OJRQ01000016
45423
Bacteroidota
TGA
Ser
>WENV182764670
OJRQ01000016
58714
Bacteroidota
CAA
Leu
>WENV182764724
OJRQ01000037
149691
Bacteroidota
GTT
Asn
>WENV182764973
OJRQ01000404
144656
Bacteroidota
GTG
His
>WENV182765044
OJRQ01000797
235207
Bacteroidota
CAT
Met
>WENV182764821
OJRQ01000131
144659
Bacteroidota
GTG
His
>WENV182764822
OJRQ01000131
144659
Bacteroidota
GTG
His
>WENV182765196
OJRQ01008475
144659
Bacteroidota
GTG
His
>WENV182764758
OJRQ01000064
235180
Bacteroidota
CCA
Trp
>WENV182764785
OJRQ01000093
80607
Bacteroidota
GTA
Tyr
>WENV182764884
OJRQ01000228
80607
Bacteroidota
GTA
Tyr
>WENV182764628
OJRQ01000004
16999
Bacteroidota
GGA
Ser
>WENV182764617
OJRQ01000001
80614
Bacteroidota
>WENV182764624
OJRQ01000003
80614
Bacteroidota
>WENV182764823
OJRQ01000131
80614
Bacteroidota
>WENV182764652
OJRQ01000009
154643
Bacteroidota
CAT
Met
>WENV182765029
OJRQ01000704
144590
Bacteroidota
GTT
Asn
>WENV182765011
OJRQ01000582
95559
Bacteroidota
TAG
Leu
>WENV182764688
OJRQ01000021
144655
Bacteroidota
GGC
Ala
>WENV182764718
OJRQ01000034
338164
Bacteroidota
TTC
Glu
>WENV182764719
OJRQ01000034
338164
Bacteroidota
TTC
Glu
>WENV182764675
OJRQ01000016
95875
Bacteroidota
TAG
Leu
>WENV182765073
OJRQ01001271
95875
Bacteroidota
TAG
Leu
>WENV182764667
OJRQ01000015
240012
Bacteroidota
CCC
Gly
>WENV182764951
OJRQ01000358
44852
Bacteroidota
TAA
Leu
>WENV182764669
OJRQ01000015
147439
Bacteroidota
TCT
Arg
>WENV182764656
OJRQ01000011
411550
Bacteroidota
CTG
Gln
>WENV182764657
OJRQ01000011
411550
Bacteroidota
CTG
Gln
>WENV182764658
OJRQ01000011
411550
Bacteroidota
CTG
Gln
>WENV182764661
OJRQ01000011
23696
Bacteroidota
GCT
Ser
>WENV182765035
OJRQ01000754
23696
Bacteroidota
GCT
Ser
>WENV182764728
OJRQ01000039
414426
Bacteroidota
CTG
Gln
>WENV182764779
OJRQ01000086
16224
Bacteroidota
GGA
Ser
>WENV182764880
OJRQ01000216
16224
Bacteroidota
GGA
Ser
>WENV182765228
OJRQ01013969
151960
Bacteroidota
GGC
Ala
>WENV182764819
OJRQ01000117
16220
Bacteroidota
GGA
Ser
>WENV182764723
OJRQ01000037
338125
Bacteroidota
CCT
Arg
>WENV182764613
OJRQ01000001
235129
Bacteroidota
GCC
Gly
>WENV182765097
OJRQ01001601
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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