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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182766187
OJRT01001900
196621
Bacillota
GTC
Asp
>WENV182766252
OJRT01003653
309417
Bacillota
GGC
Ala
>WENV182766376
OJRT01007273
309417
Bacillota
GGC
Ala
>WENV182765790
OJRT01000009
158247
Bacillota
>WENV182766168
OJRT01001636
144612
Bacillota
TCT
Arg
>WENV182766280
OJRT01004217
144612
Bacillota
TCT
Arg
>WENV182766306
OJRT01005291
235134
Bacillota
GAA
Phe
>WENV182766072
OJRT01000681
235098
Bacillota
GAC
Val
>WENV182766489
OJRT01014033
235098
Bacillota
GAC
Val
>WENV182766511
OJRT01014945
235098
Bacillota
GAC
Val
>WENV182766521
OJRT01015661
235098
Bacillota
GAC
Val
>WENV182766140
OJRT01001304
148239
Bacillota
TCT
Arg
>WENV182766195
OJRT01002090
44854
Bacillota
TGA
Ser
>WENV182766198
OJRT01002192
44854
Bacillota
TGA
Ser
>WENV182766033
OJRT01000562
37071
Bacillota
TGA
Ser
>WENV182766536
OJRT01018310
37071
Bacillota
TGA
Ser
>WENV182766175
OJRT01001781
304022
Bacillota
GCC
Gly
>WENV182766086
OJRT01000806
59312
Bacillota
CAG
Leu
>WENV182765941
OJRT01000211
338147
Bacillota
CTC
Glu
>WENV182766077
OJRT01000735
338147
Bacillota
CTC
Glu
>WENV182766211
OJRT01002581
338147
Bacillota
CTC
Glu
>WENV182766241
OJRT01003386
338147
Bacillota
CTC
Glu
>WENV182766633
OJRT01038048
235150
Bacillota
TGC
Ala
>WENV182766257
OJRT01003802
293599
Bacillota
CTT
Lys
>WENV182766238
OJRT01003342
235114
Bacillota
TTT
Lys
>WENV182766429
OJRT01009534
235114
Bacillota
TTT
Lys
>WENV182766438
OJRT01010191
429429
Bacillota
CCA
Trp
>WENV182765957
OJRT01000237
44859
Bacillota
AAG
Leu
>WENV182766085
OJRT01000806
44859
Bacillota
AAG
Leu
>WENV182766599
OJRT01029120
11034
Bacillota
GGA
Ser
>WENV182766141
OJRT01001304
156937
Bacillota
GTG
His
>WENV182766058
OJRT01000644
274189
Bacillota
TGT
Thr
>WENV182765769
OJRT01000004
235079
Bacillota
GAA
Phe
>WENV182766434
OJRT01009801
235079
Bacillota
GAA
Phe
>WENV182766591
OJRT01028095
235079
Bacillota
GAA
Phe
>WENV182766333
OJRT01005651
173314
Bacillota
GAT
Ile
>WENV182766239
OJRT01003376
338149
Bacillota
CTC
Glu
>WENV182766491
OJRT01014261
338149
Bacillota
CTC
Glu
>WENV182766247
OJRT01003522
271471
Bacillota
GCC
Gly
>WENV182766390
OJRT01007872
245298
Bacillota
CGG
Pro
>WENV182766420
OJRT01009364
245298
Bacillota
CGG
Pro
>WENV182766546
OJRT01019410
152492
Bacillota
GGG
Pro
>WENV182765767
OJRT01000004
235078
Bacillota
TAC
Val
>WENV182766638
OJRT01038657
144610
Bacillota
GTG
His
>WENV182766145
OJRT01001320
411547
Bacillota
CTG
Gln
>WENV182766230
OJRT01003027
411547
Bacillota
CTG
Gln
>WENV182766389
OJRT01007872
411547
Bacillota
CTG
Gln
>WENV182766419
OJRT01009364
411547
Bacillota
CTG
Gln
>WENV182766581
OJRT01025212
411547
Bacillota
CTG
Gln
>WENV182766196
OJRT01002090
4624
Bacillota
GCT
Ser
>WENV182766199
OJRT01002192
4624
Bacillota
GCT
Ser
>WENV182765854
OJRT01000059
263765
Bacillota
TAC
Val
>WENV182766318
OJRT01005451
263765
Bacillota
TAC
Val
>WENV182766355
OJRT01006555
263765
Bacillota
TAC
Val
>WENV182766110
OJRT01000969
313104
Bacillota
TAC
Val
>WENV182766188
OJRT01001900
235095
Bacillota
GGT
Thr
>WENV182766229
OJRT01002955
235095
Bacillota
GGT
Thr
>WENV182766436
OJRT01009953
235095
Bacillota
GGT
Thr
>WENV182766066
OJRT01000651
419639
Bacillota
GCA
Cys
>WENV182766135
OJRT01001251
411549
Bacillota
TTG
Gln
>WENV182765895
OJRT01000101
235142
Bacillota
CTT
Lys
>WENV182766346
OJRT01006215
148188
Bacillota
CCG
Arg
>WENV182766162
OJRT01001533
80612
Bacillota
GTA
Tyr
>WENV182766249
OJRT01003529
80612
Bacillota
GTA
Tyr
>WENV182766496
OJRT01014417
163943
Bacillota
GTC
Asp
>WENV182765775
OJRT01000006
298620
Bacillota
CAT
Met
>WENV182766178
OJRT01001817
235124
Bacillota
TGG
Pro
>WENV182766209
OJRT01002518
235124
Bacillota
TGG
Pro
>WENV182766642
OJRT01039719
338129
Bacillota
TGT
Thr
>WENV182766124
OJRT01001156
144583
Bacillota
ACG
Arg
>WENV182765948
OJRT01000232
144652
Bacillota
GTC
Asp
>WENV182766423
OJRT01009534
144652
Bacillota
GTC
Asp
>WENV182766628
OJRT01034774
235171
Bacillota
CCA
Trp
>WENV182766167
OJRT01001609
144621
Bacillota
GTT
Asn
>WENV182766214
OJRT01002686
144621
Bacillota
GTT
Asn
>WENV182766240
OJRT01003376
144621
Bacillota
GTT
Asn
>WENV182766439
OJRT01010328
144621
Bacillota
GTT
Asn
>WENV182766492
OJRT01014261
144621
Bacillota
GTT
Asn
>WENV182765914
OJRT01000127
235113
Bacillota
GAA
Phe
>WENV182766428
OJRT01009534
235113
Bacillota
GAA
Phe
>WENV182766575
OJRT01023578
243098
Bacillota
GGT
Thr
>WENV182766558
OJRT01020985
21693
Bacillota
GCT
Ser
>WENV182766251
OJRT01003618
245296
Bacillota
CCC
Gly
>WENV182766065
OJRT01000651
344240
Bacillota
GCC
Gly
>WENV182766508
OJRT01014610
344240
Bacillota
GCC
Gly
>WENV182766632
OJRT01037231
198135
Bacillota
GAT
Ile
>WENV182766046
OJRT01000608
196632
Bacillota
GTC
Asp
>WENV182766383
OJRT01007434
196632
Bacillota
GTC
Asp
>WENV182766507
OJRT01014610
196632
Bacillota
GTC
Asp
>WENV182766527
OJRT01017247
299139
Bacillota
TGC
Ala
>WENV182766122
OJRT01001100
95563
Bacillota
GTA
Tyr
>WENV182766426
OJRT01009534
95563
Bacillota
GTA
Tyr
>WENV182765741
OJRT01000001
338127
Bacillota
TTG
Gln
>WENV182766081
OJRT01000751
338128
Bacillota
TTC
Glu
>WENV182766184
OJRT01001849
338128
Bacillota
TTC
Glu
>WENV182766047
OJRT01000608
245344
Bacillota
GAA
Phe
>WENV182766384
OJRT01007434
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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