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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182783021
OJSF01006626
235146
Actinomycetota
CGT
Thr
>WENV182782882
OJSF01003041
201717
Actinomycetota
CTT
Lys
>WENV182783063
OJSF01009645
144600
Actinomycetota
TGG
Pro
>WENV182783091
OJSF01010504
235194
Actinomycetota
GTG
His
>WENV182782938
OJSF01004093
273786
Actinomycetota
CGT
Thr
>WENV182783109
OJSF01012433
158720
Actinomycetota
ACG
Arg
>WENV182782860
OJSF01002835
411601
Actinomycetota
CCC
Gly
>WENV182783054
OJSF01009107
144826
Actinomycetota
GGG
Pro
>WENV182782946
OJSF01004261
23370
Actinomycetota
GCT
Ser
>WENV182783157
OJSF01017714
174149
Actinomycetota
GAT
Ile
>WENV182783158
OJSF01017714
235174
Actinomycetota
TGC
Ala
>WENV182783131
OJSF01013750
121510
Actinomycetota
TAA
Leu
>WENV182783185
OJSF01020345
356045
Actinomycetota
GAC
Val
>WENV182783186
OJSF01020345
235199
Actinomycetota
CAC
Val
>WENV182783038
OJSF01008155
44862
Actinomycetota
CGA
Ser
>WENV182783055
OJSF01009182
413665
Actinomycetota
TTG
Gln
>WENV182782899
OJSF01003327
254857
Actinomycetota
CCG
Arg
>WENV182783089
OJSF01010502
295695
Actinomycetota
CTC
Glu
>WENV182783090
OJSF01010502
338148
Actinomycetota
CTG
Gln
>WENV182783073
OJSF01010176
235148
Actinomycetota
GTT
Asn
>WENV182782909
OJSF01003600
144825
Actinomycetota
CAT
Met
>WENV182782939
OJSF01004093
113601
Actinomycetota
TAG
Leu
>WENV182783104
OJSF01012169
144595
Actinomycetota
CAA
Leu
>WENV182783260
OJSF01036585
414234
Actinomycetota
CTG
Gln
>WENV182783017
OJSF01006410
47164
Actinomycetota
GGA
Ser
>WENV182783011
OJSF01006248
80622
Actinomycetota
CAG
Leu
>WENV182783034
OJSF01007657
144660
Actinomycetota
TAC
Val
>WENV182782986
OJSF01005368
95593
Actinomycetota
>WENV182783203
OJSF01024975
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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