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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182782775
OJSF01001915
24650
Bacillota
TAA
Leu
>WENV182782690
OJSF01001201
196621
Bacillota
GTC
Asp
>WENV182782686
OJSF01001180
202812
Bacillota
CAT
Met
>WENV182782973
OJSF01005058
202812
Bacillota
CAT
Met
>WENV182782531
OJSF01000519
309417
Bacillota
GGC
Ala
>WENV182782481
OJSF01000361
37213
Bacillota
TGA
Ser
>WENV182782700
OJSF01001300
144612
Bacillota
TCT
Arg
>WENV182782296
OJSF01000055
267649
Bacillota
TAC
Val
>WENV182782298
OJSF01000055
267649
Bacillota
TAC
Val
>WENV182783249
OJSF01034434
155111
Bacillota
CAT
Met
>WENV182782540
OJSF01000544
235098
Bacillota
GAC
Val
>WENV182782669
OJSF01001091
235098
Bacillota
GAC
Val
>WENV182782911
OJSF01003607
235098
Bacillota
GAC
Val
>WENV182782971
OJSF01005023
340263
Bacillota
TTC
Glu
>WENV182782569
OJSF01000656
44854
Bacillota
TGA
Ser
>WENV182782644
OJSF01000954
44854
Bacillota
TGA
Ser
>WENV182783082
OJSF01010431
235154
Bacillota
GTT
Asn
>WENV182782807
OJSF01002197
425593
Bacillota
CCC
Gly
>WENV182782647
OJSF01000963
241441
Bacillota
GCC
Gly
>WENV182782526
OJSF01000502
37549
Bacillota
TAA
Leu
>WENV182782964
OJSF01005023
148348
Bacillota
GTC
Asp
>WENV182782376
OJSF01000138
304022
Bacillota
GCC
Gly
>WENV182783211
OJSF01026279
429443
Bacillota
GCA
Cys
>WENV182783197
OJSF01022507
246023
Bacillota
TGC
Ala
>WENV182782823
OJSF01002403
193585
Bacillota
CGG
Pro
>WENV182782723
OJSF01001467
239080
Bacillota
CTG
Gln
>WENV182782658
OJSF01001032
243119
Bacillota
CTT
Lys
>WENV182782327
OJSF01000078
152047
Bacillota
GGG
Pro
>WENV182782614
OJSF01000832
16820
Bacillota
GCT
Ser
>WENV182782314
OJSF01000065
293599
Bacillota
CTT
Lys
>WENV182782411
OJSF01000183
152512
Bacillota
CCT
Arg
>WENV182782449
OJSF01000271
152459
Bacillota
GTC
Asp
>WENV182783279
OJSF01042801
338143
Bacillota
CTC
Glu
>WENV182782845
OJSF01002675
341763
Bacillota
CTC
Glu
>WENV182782316
OJSF01000069
429429
Bacillota
CCA
Trp
>WENV182782936
OJSF01004060
429429
Bacillota
CCA
Trp
>WENV182782950
OJSF01004573
429429
Bacillota
CCA
Trp
>WENV182782657
OJSF01001017
11034
Bacillota
GGA
Ser
>WENV182782956
OJSF01004692
11034
Bacillota
GGA
Ser
>WENV182782965
OJSF01005023
239076
Bacillota
GAA
Phe
>WENV182782824
OJSF01002403
10943
Bacillota
GGA
Ser
>WENV182782616
OJSF01000832
342736
Bacillota
TTG
Gln
>WENV182782375
OJSF01000138
235079
Bacillota
GAA
Phe
>WENV182782426
OJSF01000203
296878
Bacillota
GTT
Asn
>WENV182782430
OJSF01000211
340265
Bacillota
GCC
Gly
>WENV182782662
OJSF01001042
340265
Bacillota
GCC
Gly
>WENV182782663
OJSF01001042
340265
Bacillota
GCC
Gly
>WENV182782704
OJSF01001374
338149
Bacillota
CTC
Glu
>WENV182782878
OJSF01003032
338149
Bacillota
CTC
Glu
>WENV182782719
OJSF01001430
245298
Bacillota
CGG
Pro
>WENV182782609
OJSF01000805
287000
Bacillota
GTT
Asn
>WENV182782311
OJSF01000062
37551
Bacillota
CGA
Ser
>WENV182782451
OJSF01000271
81644
Bacillota
GAG
Leu
>WENV182783003
OJSF01006053
413152
Bacillota
TCC
Gly
>WENV182782916
OJSF01003741
162445
Bacillota
CAT
Met
>WENV182783196
OJSF01022507
201704
Bacillota
GAT
Ile
>WENV182782917
OJSF01003778
152492
Bacillota
GGG
Pro
>WENV182783255
OJSF01035092
153911
Bacillota
GAT
Ile
>WENV182783122
OJSF01013050
144610
Bacillota
GTG
His
>WENV182782434
OJSF01000220
411547
Bacillota
CTG
Gln
>WENV182782718
OJSF01001430
411547
Bacillota
CTG
Gln
>WENV182782758
OJSF01001742
411547
Bacillota
CTG
Gln
>WENV182782570
OJSF01000656
4624
Bacillota
GCT
Ser
>WENV182782645
OJSF01000954
4624
Bacillota
GCT
Ser
>WENV182782247
OJSF01000017
313164
Bacillota
TTT
Lys
>WENV182782673
OJSF01001125
18852
Bacillota
GCT
Ser
>WENV182782691
OJSF01001201
235095
Bacillota
GGT
Thr
>WENV182782692
OJSF01001201
235095
Bacillota
GGT
Thr
>WENV182782525
OJSF01000502
419945
Bacillota
GCA
Cys
>WENV182782410
OJSF01000183
304759
Bacillota
TAC
Val
>WENV182782660
OJSF01001042
304759
Bacillota
TAC
Val
>WENV182782532
OJSF01000519
411549
Bacillota
TTG
Gln
>WENV182782416
OJSF01000183
152045
Bacillota
CAT
Met
>WENV182782409
OJSF01000183
243398
Bacillota
TTC
Glu
>WENV182782549
OJSF01000583
37588
Bacillota
TGA
Ser
>WENV182782445
OJSF01000261
148188
Bacillota
CCG
Arg
>WENV182782309
OJSF01000062
152046
Bacillota
TCT
Arg
>WENV182782877
OJSF01003018
80612
Bacillota
GTA
Tyr
>WENV182782618
OJSF01000869
152051
Bacillota
ACG
Arg
>WENV182782435
OJSF01000221
243401
Bacillota
CGT
Thr
>WENV182782958
OJSF01004747
298620
Bacillota
CAT
Met
>WENV182782672
OJSF01001116
235124
Bacillota
TGG
Pro
>WENV182783029
OJSF01007093
235124
Bacillota
TGG
Pro
>WENV182782744
OJSF01001603
338129
Bacillota
TGT
Thr
>WENV182782732
OJSF01001525
157838
Bacillota
GTC
Asp
>WENV182782739
OJSF01001580
144583
Bacillota
ACG
Arg
>WENV182782808
OJSF01002203
144583
Bacillota
ACG
Arg
>WENV182783124
OJSF01013303
144672
Bacillota
TCT
Arg
>WENV182782689
OJSF01001201
235171
Bacillota
CCA
Trp
>WENV182782705
OJSF01001374
144621
Bacillota
GTT
Asn
>WENV182782879
OJSF01003032
144621
Bacillota
GTT
Asn
>WENV182782987
OJSF01005401
144621
Bacillota
GTT
Asn
>WENV182782598
OJSF01000777
58712
Bacillota
CAG
Leu
>WENV182782680
OJSF01001147
58712
Bacillota
CAG
Leu
>WENV182782377
OJSF01000138
245296
Bacillota
CCC
Gly
>WENV182782903
OJSF01003382
245296
Bacillota
CCC
Gly
>WENV182782415
OJSF01000183
281472
Bacillota
GGT
Thr
>WENV182783221
OJSF01028941
299139
Bacillota
TGC
Ala
>WENV182782783
OJSF01002066
144594
Bacillota
CAC
Val
>WENV182782863
OJSF01002912
144594
Bacillota
CAC
Val
>WENV182782524
OJSF01000502
384950
Bacillota
GCC
Gly
>WENV182782538
OJSF01000537
338131
Bacillota
GCC
Gly
>WENV182782447
OJSF01000261
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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