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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182784280
OJSH01000007
24650
Bacillota
TAA
Leu
>WENV182784543
OJSH01000352
37213
Bacillota
TGA
Ser
>WENV182785021
OJSH01003549
144612
Bacillota
TCT
Arg
>WENV182785058
OJSH01004184
154063
Bacillota
CGG
Pro
>WENV182784553
OJSH01000364
235098
Bacillota
GAC
Val
>WENV182784583
OJSH01000430
235098
Bacillota
GAC
Val
>WENV182784793
OJSH01001371
235098
Bacillota
GAC
Val
>WENV182785093
OJSH01004984
235098
Bacillota
GAC
Val
>WENV182784878
OJSH01001872
338152
Bacillota
TTC
Glu
>WENV182784823
OJSH01001562
340263
Bacillota
TTC
Glu
>WENV182785107
OJSH01005251
340263
Bacillota
TTC
Glu
>WENV182784674
OJSH01000762
44854
Bacillota
TGA
Ser
>WENV182784717
OJSH01000897
44854
Bacillota
TGA
Ser
>WENV182785222
OJSH01009805
235154
Bacillota
GTT
Asn
>WENV182784930
OJSH01002329
425593
Bacillota
CCC
Gly
>WENV182784678
OJSH01000773
241441
Bacillota
GCC
Gly
>WENV182784635
OJSH01000578
37549
Bacillota
TAA
Leu
>WENV182784825
OJSH01001562
148348
Bacillota
GTC
Asp
>WENV182785100
OJSH01005251
148348
Bacillota
GTC
Asp
>WENV182785224
OJSH01009983
429443
Bacillota
GCA
Cys
>WENV182785309
OJSH01018195
246023
Bacillota
TGC
Ala
>WENV182784956
OJSH01002647
193585
Bacillota
CGG
Pro
>WENV182784850
OJSH01001708
239080
Bacillota
CTG
Gln
>WENV182784770
OJSH01001234
243119
Bacillota
CTT
Lys
>WENV182784383
OJSH01000091
152047
Bacillota
GGG
Pro
>WENV182785393
OJSH01035794
413601
Bacillota
GCA
Cys
>WENV182784723
OJSH01000932
16820
Bacillota
GCT
Ser
>WENV182784418
OJSH01000149
293599
Bacillota
CTT
Lys
>WENV182784453
OJSH01000198
152512
Bacillota
CCT
Arg
>WENV182784507
OJSH01000266
152459
Bacillota
GTC
Asp
>WENV182784767
OJSH01001212
341763
Bacillota
CTC
Glu
>WENV182784356
OJSH01000078
429429
Bacillota
CCA
Trp
>WENV182785062
OJSH01004255
429429
Bacillota
CCA
Trp
>WENV182784684
OJSH01000791
11034
Bacillota
GGA
Ser
>WENV182785087
OJSH01004920
11034
Bacillota
GGA
Ser
>WENV182784826
OJSH01001562
239076
Bacillota
GAA
Phe
>WENV182785101
OJSH01005251
239076
Bacillota
GAA
Phe
>WENV182784957
OJSH01002647
10943
Bacillota
GGA
Ser
>WENV182785128
OJSH01005812
274189
Bacillota
TGT
Thr
>WENV182784725
OJSH01000932
342736
Bacillota
TTG
Gln
>WENV182784783
OJSH01001337
235079
Bacillota
GAA
Phe
>WENV182784479
OJSH01000219
296878
Bacillota
GTT
Asn
>WENV182785036
OJSH01003743
295714
Bacillota
GCC
Gly
>WENV182784482
OJSH01000231
340265
Bacillota
GCC
Gly
>WENV182784633
OJSH01000578
340265
Bacillota
GCC
Gly
>WENV182784764
OJSH01001187
340265
Bacillota
GCC
Gly
>WENV182784402
OJSH01000126
152513
Bacillota
GAC
Val
>WENV182784887
OJSH01001934
338149
Bacillota
CTC
Glu
>WENV182785068
OJSH01004485
338149
Bacillota
CTC
Glu
>WENV182784730
OJSH01000952
245298
Bacillota
CGG
Pro
>WENV182784916
OJSH01002186
245298
Bacillota
CGG
Pro
>WENV182784879
OJSH01001872
287000
Bacillota
GTT
Asn
>WENV182784376
OJSH01000088
37551
Bacillota
CGA
Ser
>WENV182784508
OJSH01000266
81644
Bacillota
GAG
Leu
>WENV182784870
OJSH01001864
413152
Bacillota
TCC
Gly
>WENV182785388
OJSH01035533
413152
Bacillota
TCC
Gly
>WENV182784927
OJSH01002300
162445
Bacillota
CAT
Met
>WENV182785017
OJSH01003464
152492
Bacillota
GGG
Pro
>WENV182785161
OJSH01007026
144610
Bacillota
GTG
His
>WENV182784689
OJSH01000797
411547
Bacillota
CTG
Gln
>WENV182784729
OJSH01000952
411547
Bacillota
CTG
Gln
>WENV182784831
OJSH01001596
411547
Bacillota
CTG
Gln
>WENV182784915
OJSH01002186
411547
Bacillota
CTG
Gln
>WENV182784675
OJSH01000762
4624
Bacillota
GCT
Ser
>WENV182784718
OJSH01000897
4624
Bacillota
GCT
Ser
>WENV182784540
OJSH01000345
18852
Bacillota
GCT
Ser
>WENV182785130
OJSH01005816
235095
Bacillota
GGT
Thr
>WENV182784634
OJSH01000578
419945
Bacillota
GCA
Cys
>WENV182784824
OJSH01001562
239079
Bacillota
TAC
Val
>WENV182784827
OJSH01001562
239079
Bacillota
TAC
Val
>WENV182784835
OJSH01001616
411549
Bacillota
TTG
Gln
>WENV182784458
OJSH01000198
152045
Bacillota
CAT
Met
>WENV182784451
OJSH01000198
243398
Bacillota
TTC
Glu
>WENV182784643
OJSH01000656
37588
Bacillota
TGA
Ser
>WENV182785063
OJSH01004314
148188
Bacillota
CCG
Arg
>WENV182785139
OJSH01005987
148188
Bacillota
CCG
Arg
>WENV182784374
OJSH01000088
152046
Bacillota
TCT
Arg
>WENV182785268
OJSH01012890
298639
Bacillota
GTT
Asn
>WENV182785175
OJSH01007509
80612
Bacillota
GTA
Tyr
>WENV182784414
OJSH01000140
235127
Bacillota
TTT
Lys
>WENV182784733
OJSH01000986
152051
Bacillota
ACG
Arg
>WENV182784307
OJSH01000023
243401
Bacillota
CGT
Thr
>WENV182784844
OJSH01001675
235124
Bacillota
TGG
Pro
>WENV182785167
OJSH01007205
235124
Bacillota
TGG
Pro
>WENV182785008
OJSH01003425
338129
Bacillota
TGT
Thr
>WENV182784866
OJSH01001852
157838
Bacillota
GTC
Asp
>WENV182784864
OJSH01001820
144583
Bacillota
ACG
Arg
>WENV182784980
OJSH01002814
144583
Bacillota
ACG
Arg
>WENV182784949
OJSH01002551
235171
Bacillota
CCA
Trp
>WENV182784888
OJSH01001934
144621
Bacillota
GTT
Asn
>WENV182785069
OJSH01004485
144621
Bacillota
GTT
Asn
>WENV182784626
OJSH01000553
58712
Bacillota
CAG
Leu
>WENV182784794
OJSH01001379
58712
Bacillota
CAG
Leu
>WENV182784469
OJSH01000207
245296
Bacillota
CCC
Gly
>WENV182784931
OJSH01002340
245296
Bacillota
CCC
Gly
>WENV182784808
OJSH01001442
272992
Bacillota
CTT
Lys
>WENV182784822
OJSH01001562
239078
Bacillota
TTT
Lys
>WENV182784457
OJSH01000198
281472
Bacillota
GGT
Thr
>WENV182785040
OJSH01003819
248965
Bacillota
GCC
Gly
>WENV182784503
OJSH01000256
144594
Bacillota
CAC
Val
>WENV182785095
OJSH01005095
292012
Bacillota
TGC
Ala
>WENV182785204
OJSH01008550
338131
Bacillota
GCC
Gly
>WENV182784574
OJSH01000410
338128
Bacillota
TTC
Glu
>WENV182784895
OJSH01002014
338128
Bacillota
TTC
Glu
>WENV182785072
OJSH01004503
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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