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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182786831
OJSJ01000488
24650
Bacillota
TAA
Leu
>WENV182786659
OJSJ01000178
37213
Bacillota
TGA
Ser
>WENV182786766
OJSJ01000364
144612
Bacillota
TCT
Arg
>WENV182787125
OJSJ01002867
144612
Bacillota
TCT
Arg
>WENV182786710
OJSJ01000265
267556
Bacillota
TAC
Val
>WENV182786628
OJSJ01000130
339890
Bacillota
TTG
Gln
>WENV182786847
OJSJ01000558
235098
Bacillota
GAC
Val
>WENV182787196
OJSJ01004008
235098
Bacillota
GAC
Val
>WENV182786996
OJSJ01001471
338152
Bacillota
TTC
Glu
>WENV182786679
OJSJ01000208
340263
Bacillota
TTC
Glu
>WENV182786526
OJSJ01000031
44854
Bacillota
TGA
Ser
>WENV182786528
OJSJ01000031
44854
Bacillota
TGA
Ser
>WENV182787070
OJSJ01001958
235154
Bacillota
GTT
Asn
>WENV182786881
OJSJ01000699
241441
Bacillota
GCC
Gly
>WENV182786687
OJSJ01000224
37549
Bacillota
TAA
Leu
>WENV182786986
OJSJ01001415
148348
Bacillota
GTC
Asp
>WENV182786984
OJSJ01001370
239080
Bacillota
CTG
Gln
>WENV182786931
OJSJ01000987
243119
Bacillota
CTT
Lys
>WENV182786584
OJSJ01000078
152047
Bacillota
GGG
Pro
>WENV182786902
OJSJ01000837
16820
Bacillota
GCT
Ser
>WENV182786615
OJSJ01000119
152512
Bacillota
CCT
Arg
>WENV182786706
OJSJ01000260
152459
Bacillota
GTC
Asp
>WENV182786954
OJSJ01001162
341763
Bacillota
CTC
Glu
>WENV182787074
OJSJ01001958
144668
Bacillota
GTC
Asp
>WENV182786841
OJSJ01000532
11034
Bacillota
GGA
Ser
>WENV182787192
OJSJ01003876
11034
Bacillota
GGA
Ser
>WENV182786987
OJSJ01001415
239076
Bacillota
GAA
Phe
>WENV182787084
OJSJ01002078
10943
Bacillota
GGA
Ser
>WENV182786672
OJSJ01000208
235697
Bacillota
GTT
Asn
>WENV182786904
OJSJ01000837
342736
Bacillota
TTG
Gln
>WENV182787162
OJSJ01003434
235079
Bacillota
GAA
Phe
>WENV182786685
OJSJ01000224
340265
Bacillota
GCC
Gly
>WENV182786693
OJSJ01000232
340265
Bacillota
GCC
Gly
>WENV182786934
OJSJ01001001
340265
Bacillota
GCC
Gly
>WENV182786530
OJSJ01000031
338149
Bacillota
CTC
Glu
>WENV182787206
OJSJ01004353
338149
Bacillota
CTC
Glu
>WENV182787029
OJSJ01001732
245298
Bacillota
CGG
Pro
>WENV182786574
OJSJ01000073
37551
Bacillota
CGA
Ser
>WENV182786707
OJSJ01000260
81644
Bacillota
GAG
Leu
>WENV182786747
OJSJ01000343
413152
Bacillota
TCC
Gly
>WENV182787181
OJSJ01003670
162445
Bacillota
CAT
Met
>WENV182786627
OJSJ01000130
144610
Bacillota
GTG
His
>WENV182786872
OJSJ01000676
411547
Bacillota
CTG
Gln
>WENV182786945
OJSJ01001100
411547
Bacillota
CTG
Gln
>WENV182787028
OJSJ01001732
411547
Bacillota
CTG
Gln
>WENV182786527
OJSJ01000031
4624
Bacillota
GCT
Ser
>WENV182786529
OJSJ01000031
4624
Bacillota
GCT
Ser
>WENV182786684
OJSJ01000219
18852
Bacillota
GCT
Ser
>WENV182787131
OJSJ01002893
235095
Bacillota
GGT
Thr
>WENV182787255
OJSJ01006660
235095
Bacillota
GGT
Thr
>WENV182786686
OJSJ01000224
419945
Bacillota
GCA
Cys
>WENV182786988
OJSJ01001415
239079
Bacillota
TAC
Val
>WENV182786773
OJSJ01000375
411549
Bacillota
TTG
Gln
>WENV182787080
OJSJ01002030
152045
Bacillota
CAT
Met
>WENV182786613
OJSJ01000119
243398
Bacillota
TTC
Glu
>WENV182786856
OJSJ01000598
37588
Bacillota
TGA
Ser
>WENV182786720
OJSJ01000285
148188
Bacillota
CCG
Arg
>WENV182786572
OJSJ01000073
152046
Bacillota
TCT
Arg
>WENV182787171
OJSJ01003542
80612
Bacillota
GTA
Tyr
>WENV182786629
OJSJ01000130
235127
Bacillota
TTT
Lys
>WENV182786906
OJSJ01000859
152051
Bacillota
ACG
Arg
>WENV182786520
OJSJ01000024
243401
Bacillota
CGT
Thr
>WENV182786928
OJSJ01000984
235124
Bacillota
TGG
Pro
>WENV182787250
OJSJ01006268
235124
Bacillota
TGG
Pro
>WENV182786772
OJSJ01000375
338129
Bacillota
TGT
Thr
>WENV182787050
OJSJ01001900
157838
Bacillota
GTC
Asp
>WENV182786969
OJSJ01001277
144583
Bacillota
ACG
Arg
>WENV182786531
OJSJ01000031
144621
Bacillota
GTT
Asn
>WENV182787207
OJSJ01004353
144621
Bacillota
GTT
Asn
>WENV182786887
OJSJ01000738
58712
Bacillota
CAG
Leu
>WENV182786840
OJSJ01000531
245296
Bacillota
CCC
Gly
>WENV182787110
OJSJ01002598
245296
Bacillota
CCC
Gly
>WENV182786966
OJSJ01001250
272992
Bacillota
CTT
Lys
>WENV182787095
OJSJ01002291
239078
Bacillota
TTT
Lys
>WENV182787175
OJSJ01003649
248965
Bacillota
GCC
Gly
>WENV182787147
OJSJ01003106
242686
Bacillota
TGC
Ala
>WENV182786864
OJSJ01000642
144594
Bacillota
CAC
Val
>WENV182787044
OJSJ01001818
272488
Bacillota
GAA
Phe
>WENV182787163
OJSJ01003434
249259
Bacillota
GCC
Gly
>WENV182786722
OJSJ01000285
338128
Bacillota
TTC
Glu
>WENV182787041
OJSJ01001796
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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