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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182791357
OJSN01003232
196621
Bacillota
GTC
Asp
>WENV182791842
OJSN01027994
144612
Bacillota
TCT
Arg
>WENV182790802
OJSN01000015
154063
Bacillota
CGG
Pro
>WENV182791063
OJSN01000466
339890
Bacillota
TTG
Gln
>WENV182791522
OJSN01007504
235098
Bacillota
GAC
Val
>WENV182791903
OJSN01036257
338152
Bacillota
TTC
Glu
>WENV182790937
OJSN01000187
23769
Bacillota
TAA
Leu
>WENV182791579
OJSN01009378
148239
Bacillota
TCT
Arg
>WENV182791896
OJSN01035736
44854
Bacillota
TGA
Ser
>WENV182791510
OJSN01007111
425593
Bacillota
CCC
Gly
>WENV182791056
OJSN01000456
37549
Bacillota
TAA
Leu
>WENV182791737
OJSN01016502
304022
Bacillota
GCC
Gly
>WENV182791460
OJSN01005425
59312
Bacillota
CAG
Leu
>WENV182791616
OJSN01010773
193585
Bacillota
CGG
Pro
>WENV182791720
OJSN01015148
243119
Bacillota
CTT
Lys
>WENV182790893
OJSN01000105
338147
Bacillota
CTC
Glu
>WENV182790954
OJSN01000219
338147
Bacillota
CTC
Glu
>WENV182791187
OJSN01001224
338147
Bacillota
CTC
Glu
>WENV182791433
OJSN01004808
338147
Bacillota
CTC
Glu
>WENV182791624
OJSN01011013
338147
Bacillota
CTC
Glu
>WENV182791815
OJSN01025526
152047
Bacillota
GGG
Pro
>WENV182791671
OJSN01013005
16820
Bacillota
GCT
Ser
>WENV182791413
OJSN01004341
293599
Bacillota
CTT
Lys
>WENV182791847
OJSN01028638
152512
Bacillota
CCT
Arg
>WENV182791676
OJSN01013133
152459
Bacillota
GTC
Asp
>WENV182790968
OJSN01000249
235114
Bacillota
TTT
Lys
>WENV182791037
OJSN01000437
429429
Bacillota
CCA
Trp
>WENV182790913
OJSN01000139
44859
Bacillota
AAG
Leu
>WENV182791459
OJSN01005425
44859
Bacillota
AAG
Leu
>WENV182791738
OJSN01016535
11034
Bacillota
GGA
Ser
>WENV182791778
OJSN01020899
235117
Bacillota
TAC
Val
>WENV182791617
OJSN01010773
10943
Bacillota
GGA
Ser
>WENV182790998
OJSN01000323
274189
Bacillota
TGT
Thr
>WENV182791750
OJSN01017675
342736
Bacillota
TTG
Gln
>WENV182791736
OJSN01016502
235079
Bacillota
GAA
Phe
>WENV182791659
OJSN01012588
296878
Bacillota
GTT
Asn
>WENV182791835
OJSN01027203
340265
Bacillota
GCC
Gly
>WENV182791612
OJSN01010683
152513
Bacillota
GAC
Val
>WENV182791375
OJSN01003641
245298
Bacillota
CGG
Pro
>WENV182791698
OJSN01014061
245298
Bacillota
CGG
Pro
>WENV182791526
OJSN01007651
287000
Bacillota
GTT
Asn
>WENV182791762
OJSN01019381
37551
Bacillota
CGA
Ser
>WENV182791828
OJSN01026417
169968
Bacillota
CAT
Met
>WENV182791677
OJSN01013133
81644
Bacillota
GAG
Leu
>WENV182791105
OJSN01000650
413152
Bacillota
TCC
Gly
>WENV182791442
OJSN01005031
162445
Bacillota
CAT
Met
>WENV182792023
OJSN01076768
201704
Bacillota
GAT
Ile
>WENV182791103
OJSN01000640
100326
Bacillota
GTA
Tyr
>WENV182791580
OJSN01009378
144610
Bacillota
GTG
His
>WENV182791374
OJSN01003641
411547
Bacillota
CTG
Gln
>WENV182791697
OJSN01014061
411547
Bacillota
CTG
Gln
>WENV182791687
OJSN01013590
147684
Bacillota
ACG
Arg
>WENV182791897
OJSN01035736
4624
Bacillota
GCT
Ser
>WENV182791661
OJSN01012588
248683
Bacillota
TTT
Lys
>WENV182791782
OJSN01021510
243399
Bacillota
CCA
Trp
>WENV182791840
OJSN01027898
18852
Bacillota
GCT
Ser
>WENV182791358
OJSN01003232
235095
Bacillota
GGT
Thr
>WENV182791712
OJSN01014589
235095
Bacillota
GGT
Thr
>WENV182790810
OJSN01000019
344183
Bacillota
CTG
Gln
>WENV182791660
OJSN01012588
344183
Bacillota
CTG
Gln
>WENV182791055
OJSN01000456
419945
Bacillota
GCA
Cys
>WENV182791467
OJSN01005523
411549
Bacillota
TTG
Gln
>WENV182791662
OJSN01012588
243398
Bacillota
TTC
Glu
>WENV182791041
OJSN01000441
235142
Bacillota
CTT
Lys
>WENV182791096
OJSN01000582
235142
Bacillota
CTT
Lys
>WENV182791586
OJSN01009534
37588
Bacillota
TGA
Ser
>WENV182791198
OJSN01001297
148188
Bacillota
CCG
Arg
>WENV182791367
OJSN01003416
148188
Bacillota
CCG
Arg
>WENV182791382
OJSN01003851
148188
Bacillota
CCG
Arg
>WENV182791801
OJSN01024017
152046
Bacillota
TCT
Arg
>WENV182791417
OJSN01004456
80612
Bacillota
GTA
Tyr
>WENV182791783
OJSN01021510
152051
Bacillota
ACG
Arg
>WENV182791694
OJSN01013869
243401
Bacillota
CGT
Thr
>WENV182790843
OJSN01000041
163943
Bacillota
GTC
Asp
>WENV182791919
OJSN01040979
241432
Bacillota
TGT
Thr
>WENV182791691
OJSN01013760
235124
Bacillota
TGG
Pro
>WENV182791846
OJSN01028227
338129
Bacillota
TGT
Thr
>WENV182791816
OJSN01025527
157838
Bacillota
GTC
Asp
>WENV182791341
OJSN01002799
144583
Bacillota
ACG
Arg
>WENV182791673
OJSN01013107
247734
Bacillota
TGC
Ala
>WENV182791356
OJSN01003232
235171
Bacillota
CCA
Trp
>WENV182791347
OJSN01002870
144621
Bacillota
GTT
Asn
>WENV182790967
OJSN01000249
235113
Bacillota
GAA
Phe
>WENV182791594
OJSN01009749
58712
Bacillota
CAG
Leu
>WENV182791735
OJSN01016441
245296
Bacillota
CCC
Gly
>WENV182791822
OJSN01025901
281472
Bacillota
GGT
Thr
>WENV182791945
OJSN01047417
299139
Bacillota
TGC
Ala
>WENV182791476
OJSN01005863
144594
Bacillota
CAC
Val
>WENV182790953
OJSN01000219
95563
Bacillota
GTA
Tyr
>WENV182791829
OJSN01026417
272488
Bacillota
GAA
Phe
>WENV182791658
OJSN01012588
384950
Bacillota
GCC
Gly
>WENV182791602
OJSN01010157
273862
Bacillota
TGC
Ala
>WENV182791003
OJSN01000327
338128
Bacillota
TTC
Glu
>WENV182791154
OJSN01000971
338128
Bacillota
TTC
Glu
>WENV182791315
OJSN01002410
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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