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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182800227
OJTZ01002404
147158
Actinomycetota
TTT
Lys
>WENV182800222
OJTZ01002092
147155
Actinomycetota
GTC
Asp
>WENV182800224
OJTZ01002165
147157
Actinomycetota
TAC
Val
>WENV182800214
OJTZ01001756
80900
Actinomycetota
TGA
Ser
>WENV182800245
OJTZ01003685
339641
Actinomycetota
GAC
Val
>WENV182800216
OJTZ01001831
428901
Actinomycetota
CCC
Gly
>WENV182800231
OJTZ01002643
339640
Actinomycetota
CTG
Gln
>WENV182800229
OJTZ01002444
289966
Actinomycetota
ACG
Arg
>WENV182800217
OJTZ01001889
237815
Actinomycetota
CTT
Lys
>WENV182800204
OJTZ01001006
80899
Actinomycetota
CAG
Leu
>WENV182800223
OJTZ01002092
147156
Actinomycetota
GAA
Phe
>WENV182800200
OJTZ01000914
237804
Actinomycetota
TGT
Thr
>WENV182800199
OJTZ01000807
237803
Actinomycetota
CGT
Thr
>WENV182800232
OJTZ01002643
237812
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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