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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182804389
OJUT01003449
80838
Bacillota
GTA
Tyr
>WENV182804392
OJUT01003449
80838
Bacillota
GTA
Tyr
>WENV182804394
OJUT01003449
80838
Bacillota
GTA
Tyr
>WENV182804391
OJUT01003449
237285
Bacillota
TGT
Thr
>WENV182804393
OJUT01003449
237285
Bacillota
TGT
Thr
>WENV182804385
OJUT01001869
237286
Bacillota
CTT
Lys
>WENV182804354
OJUT01000833
295019
Bacillota
TGC
Ala
>WENV182804384
OJUT01001869
412107
Bacillota
TCC
Gly
>WENV182804347
OJUT01000557
340941
Bacillota
GCA
Cys
>WENV182804383
OJUT01001869
339364
Bacillota
TTG
Gln
>WENV182804339
OJUT01000470
314670
Bacillota
GAA
Phe
>WENV182804390
OJUT01003449
237284
Bacillota
TAC
Val
>WENV182804387
OJUT01002602
23575
Bacillota
GGA
Ser
>WENV182804382
OJUT01001869
145469
Bacillota
TCT
Arg
>WENV182804244
OJUT01000046
287296
Bacillota
TTT
Lys
>WENV182804271
OJUT01000074
287296
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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