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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182805882
OJVJ01000086
338155
Bacteroidota
CTC
Glu
>WENV182805794
OJVJ01000001
95618
Bacteroidota
TAG
Leu
>WENV182805862
OJVJ01000037
411543
Bacteroidota
CTG
Gln
>WENV182805845
OJVJ01000027
235182
Bacteroidota
>WENV182805878
OJVJ01000076
272983
Bacteroidota
CGT
Thr
>WENV182805828
OJVJ01000014
338132
Bacteroidota
GCA
Cys
>WENV182805886
OJVJ01000092
144688
Bacteroidota
CAT
Met
>WENV182805804
OJVJ01000004
181746
Bacteroidota
GGC
Ala
>WENV182805871
OJVJ01000047
144933
Bacteroidota
TCT
Arg
>WENV182805873
OJVJ01000058
235207
Bacteroidota
CAT
Met
>WENV182805829
OJVJ01000015
80607
Bacteroidota
GTA
Tyr
>WENV182805826
OJVJ01000014
52358
Bacteroidota
TGA
Ser
>WENV182805827
OJVJ01000014
52358
Bacteroidota
TGA
Ser
>WENV182805850
OJVJ01000032
338314
Bacteroidota
CCT
Arg
>WENV182805822
OJVJ01000011
338165
Bacteroidota
GGT
Thr
>WENV182805863
OJVJ01000037
132360
Bacteroidota
GGG
Pro
>WENV182805836
OJVJ01000023
19317
Bacteroidota
GGA
Ser
>WENV182805870
OJVJ01000046
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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