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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182813661
OJYF01000215
147155
Actinomycetota
GTC
Asp
>WENV182813675
OJYF01000989
237816
Actinomycetota
GGT
Thr
>WENV182813666
OJYF01000289
37209
Actinomycetota
GAG
Leu
>WENV182813670
OJYF01000394
147157
Actinomycetota
TAC
Val
>WENV182813663
OJYF01000229
80900
Actinomycetota
TGA
Ser
>WENV182813680
OJYF01001307
339641
Actinomycetota
GAC
Val
>WENV182813672
OJYF01000650
428901
Actinomycetota
CCC
Gly
>WENV182813681
OJYF01001625
80899
Actinomycetota
CAG
Leu
>WENV182813662
OJYF01000215
147156
Actinomycetota
GAA
Phe
>WENV182813676
OJYF01000989
338489
Actinomycetota
CAT
Met
>WENV182813673
OJYF01000755
237803
Actinomycetota
CGT
Thr
>WENV182813674
OJYF01000803
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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