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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182813908
OJYG01000952
235146
Actinomycetota
CGT
Thr
>WENV182813898
OJYG01000801
235347
Actinomycetota
GGC
Ala
>WENV182813911
OJYG01000978
166493
Actinomycetota
CTT
Lys
>WENV182813914
OJYG01001016
235194
Actinomycetota
GTG
His
>WENV182813885
OJYG01000658
273786
Actinomycetota
CGT
Thr
>WENV182813893
OJYG01000755
158720
Actinomycetota
ACG
Arg
>WENV182813916
OJYG01001030
144826
Actinomycetota
GGG
Pro
>WENV182813851
OJYG01000401
23370
Actinomycetota
GCT
Ser
>WENV182813920
OJYG01001231
174149
Actinomycetota
GAT
Ile
>WENV182813917
OJYG01001045
338239
Actinomycetota
TTC
Glu
>WENV182813921
OJYG01001231
235174
Actinomycetota
TGC
Ala
>WENV182813962
OJYG01001531
121510
Actinomycetota
TAA
Leu
>WENV182813843
OJYG01000321
356045
Actinomycetota
GAC
Val
>WENV182813844
OJYG01000321
235199
Actinomycetota
CAC
Val
>WENV182813738
OJYG01000010
149271
Actinomycetota
CAT
Met
>WENV182813837
OJYG01000285
44862
Actinomycetota
CGA
Ser
>WENV182813897
OJYG01000801
413665
Actinomycetota
TTG
Gln
>WENV182813890
OJYG01000673
254857
Actinomycetota
CCG
Arg
>WENV182813850
OJYG01000401
144700
Actinomycetota
CAT
Met
>WENV182813880
OJYG01000584
243671
Actinomycetota
CTC
Glu
>WENV182813881
OJYG01000584
338148
Actinomycetota
CTG
Gln
>WENV182813901
OJYG01000833
235148
Actinomycetota
GTT
Asn
>WENV182813853
OJYG01000430
144825
Actinomycetota
CAT
Met
>WENV182813718
OJYG01000001
412384
Actinomycetota
CCC
Gly
>WENV182813840
OJYG01000302
412399
Actinomycetota
CCC
Gly
>WENV182813725
OJYG01000002
162402
Actinomycetota
GGG
Pro
>WENV182813915
OJYG01001024
235348
Actinomycetota
CCT
Arg
>WENV182813886
OJYG01000658
113601
Actinomycetota
TAG
Leu
>WENV182813903
OJYG01000886
144595
Actinomycetota
CAA
Leu
>WENV182813906
OJYG01000918
163764
Actinomycetota
TGG
Pro
>WENV182813830
OJYG01000273
47164
Actinomycetota
GGA
Ser
>WENV182813990
OJYG01001925
17009
Actinomycetota
GAG
Leu
>WENV182813854
OJYG01000447
80622
Actinomycetota
CAG
Leu
>WENV182813909
OJYG01000963
243162
Actinomycetota
GTT
Asn
>WENV182813945
OJYG01001510
144660
Actinomycetota
TAC
Val
>WENV182813849
OJYG01000401
95593
Actinomycetota
>WENV182813891
OJYG01000703
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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