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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182819345
OKAC01000020
235146
Actinomycetota
CGT
Thr
>WENV182819375
OKAC01000079
235347
Actinomycetota
GGC
Ala
>WENV182819337
OKAC01000007
201717
Actinomycetota
CTT
Lys
>WENV182819328
OKAC01000001
235194
Actinomycetota
GTG
His
>WENV182819449
OKAC01001495
273786
Actinomycetota
CGT
Thr
>WENV182819381
OKAC01000094
158720
Actinomycetota
ACG
Arg
>WENV182819446
OKAC01001357
158720
Actinomycetota
ACG
Arg
>WENV182819393
OKAC01000215
411601
Actinomycetota
CCC
Gly
>WENV182819361
OKAC01000059
144826
Actinomycetota
GGG
Pro
>WENV182819355
OKAC01000037
23370
Actinomycetota
GCT
Ser
>WENV182819331
OKAC01000003
174149
Actinomycetota
GAT
Ile
>WENV182819379
OKAC01000092
338239
Actinomycetota
TTC
Glu
>WENV182819332
OKAC01000003
235174
Actinomycetota
TGC
Ala
>WENV182819326
OKAC01000001
121510
Actinomycetota
TAA
Leu
>WENV182819378
OKAC01000091
44855
Actinomycetota
TGA
Ser
>WENV182819349
OKAC01000028
44862
Actinomycetota
CGA
Ser
>WENV182819374
OKAC01000079
413665
Actinomycetota
TTG
Gln
>WENV182819359
OKAC01000059
254857
Actinomycetota
CCG
Arg
>WENV182819354
OKAC01000037
144700
Actinomycetota
CAT
Met
>WENV182819340
OKAC01000010
295695
Actinomycetota
CTC
Glu
>WENV182819341
OKAC01000010
338148
Actinomycetota
CTG
Gln
>WENV182819347
OKAC01000023
235148
Actinomycetota
GTT
Asn
>WENV182819377
OKAC01000085
53078
Actinomycetota
GGA
Ser
>WENV182819338
OKAC01000008
144825
Actinomycetota
CAT
Met
>WENV182819339
OKAC01000008
235348
Actinomycetota
CCT
Arg
>WENV182819450
OKAC01001495
113601
Actinomycetota
TAG
Leu
>WENV182819327
OKAC01000001
144595
Actinomycetota
CAA
Leu
>WENV182819376
OKAC01000079
163764
Actinomycetota
TGG
Pro
>WENV182819329
OKAC01000002
17009
Actinomycetota
GAG
Leu
>WENV182819348
OKAC01000027
80622
Actinomycetota
CAG
Leu
>WENV182819394
OKAC01000223
243162
Actinomycetota
GTT
Asn
>WENV182819344
OKAC01000016
144660
Actinomycetota
TAC
Val
>WENV182819353
OKAC01000037
95593
Actinomycetota
>WENV182819325
OKAC01000001
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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