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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182820507
OKAN01000723
201717
Actinomycetota
CTT
Lys
>WENV182820489
OKAN01000119
375210
Actinomycetota
CTG
Gln
>WENV182820530
OKAN01001747
235194
Actinomycetota
GTG
His
>WENV182820522
OKAN01001212
158720
Actinomycetota
ACG
Arg
>WENV182820532
OKAN01002010
144826
Actinomycetota
GGG
Pro
>WENV182820525
OKAN01001243
356045
Actinomycetota
GAC
Val
>WENV182820501
OKAN01000512
235199
Actinomycetota
CAC
Val
>WENV182820483
OKAN01000093
149271
Actinomycetota
CAT
Met
>WENV182820539
OKAN01003105
144700
Actinomycetota
CAT
Met
>WENV182820542
OKAN01003493
295695
Actinomycetota
CTC
Glu
>WENV182820500
OKAN01000473
338148
Actinomycetota
CTG
Gln
>WENV182820498
OKAN01000338
235148
Actinomycetota
GTT
Asn
>WENV182820499
OKAN01000340
53078
Actinomycetota
GGA
Ser
>WENV182820521
OKAN01001026
144825
Actinomycetota
CAT
Met
>WENV182820481
OKAN01000080
412384
Actinomycetota
CCC
Gly
>WENV182820472
OKAN01000051
162402
Actinomycetota
GGG
Pro
>WENV182820494
OKAN01000223
235348
Actinomycetota
CCT
Arg
>WENV182820546
OKAN01004646
144595
Actinomycetota
CAA
Leu
>WENV182820529
OKAN01001515
431657
Actinomycetota
CCC
Gly
>WENV182820493
OKAN01000209
80622
Actinomycetota
CAG
Leu
>WENV182820461
OKAN01000019
388111
Actinomycetota
>WENV182820538
OKAN01003105
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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