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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182853659
OKMM01000512
144657
Bacteroidota
CGG
Pro
>WENV182853539
OKMM01000003
338155
Bacteroidota
CTC
Glu
>WENV182853629
OKMM01000245
338155
Bacteroidota
CTC
Glu
>WENV182853763
OKMM01006192
150845
Bacteroidota
GTC
Asp
>WENV182853616
OKMM01000144
339341
Bacteroidota
GGT
Thr
>WENV182853664
OKMM01000591
343138
Bacteroidota
CCT
Arg
>WENV182853743
OKMM01002874
46165
Bacteroidota
TGA
Ser
>WENV182853593
OKMM01000064
95618
Bacteroidota
TAG
Leu
>WENV182853769
OKMM01007581
338486
Bacteroidota
CAT
Met
>WENV182853555
OKMM01000017
411543
Bacteroidota
CTG
Gln
>WENV182853636
OKMM01000308
59689
Bacteroidota
CAG
Leu
>WENV182853604
OKMM01000084
235182
Bacteroidota
>WENV182853635
OKMM01000300
235203
Bacteroidota
TTT
Lys
>WENV182853770
OKMM01007819
238121
Bacteroidota
CTT
Lys
>WENV182853703
OKMM01001271
126641
Bacteroidota
TAC
Val
>WENV182853631
OKMM01000252
338132
Bacteroidota
GCA
Cys
>WENV182853651
OKMM01000449
338132
Bacteroidota
GCA
Cys
>WENV182853630
OKMM01000247
144688
Bacteroidota
CAT
Met
>WENV182853573
OKMM01000028
58714
Bacteroidota
CAA
Leu
>WENV182853569
OKMM01000022
144933
Bacteroidota
TCT
Arg
>WENV182853589
OKMM01000059
149691
Bacteroidota
GTT
Asn
>WENV182853590
OKMM01000059
149691
Bacteroidota
GTT
Asn
>WENV182853683
OKMM01000745
235207
Bacteroidota
CAT
Met
>WENV182853731
OKMM01002009
144659
Bacteroidota
GTG
His
>WENV182853660
OKMM01000512
235180
Bacteroidota
CCA
Trp
>WENV182853594
OKMM01000067
144596
Bacteroidota
GGC
Ala
>WENV182853584
OKMM01000043
80607
Bacteroidota
GTA
Tyr
>WENV182853728
OKMM01001773
80614
Bacteroidota
>WENV182853620
OKMM01000179
338164
Bacteroidota
TTC
Glu
>WENV182853671
OKMM01000664
95875
Bacteroidota
TAG
Leu
>WENV182853607
OKMM01000105
338314
Bacteroidota
CCT
Arg
>WENV182853745
OKMM01003034
240012
Bacteroidota
CCC
Gly
>WENV182853737
OKMM01002288
147439
Bacteroidota
TCT
Arg
>WENV182853676
OKMM01000700
411550
Bacteroidota
CTG
Gln
>WENV182853677
OKMM01000700
411550
Bacteroidota
CTG
Gln
>WENV182853622
OKMM01000197
338165
Bacteroidota
GGT
Thr
>WENV182853725
OKMM01001660
23696
Bacteroidota
GCT
Ser
>WENV182853732
OKMM01002033
338125
Bacteroidota
CCT
Arg
>WENV182853628
OKMM01000237
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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