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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182859401
OKOM01002164
235194
Actinomycetota
GTG
His
>WENV182859392
OKOM01000682
144826
Actinomycetota
GGG
Pro
>WENV182859399
OKOM01002125
174149
Actinomycetota
GAT
Ile
>WENV182859400
OKOM01002125
235174
Actinomycetota
TGC
Ala
>WENV182859409
OKOM01003431
356045
Actinomycetota
GAC
Val
>WENV182859402
OKOM01002263
44855
Actinomycetota
TGA
Ser
>WENV182859410
OKOM01003431
235199
Actinomycetota
CAC
Val
>WENV182859411
OKOM01003467
44862
Actinomycetota
CGA
Ser
>WENV182859404
OKOM01002670
413665
Actinomycetota
TTG
Gln
>WENV182859419
OKOM01005289
295695
Actinomycetota
CTC
Glu
>WENV182859420
OKOM01005289
338148
Actinomycetota
CTG
Gln
>WENV182859396
OKOM01001468
144825
Actinomycetota
CAT
Met
>WENV182859405
OKOM01003234
235348
Actinomycetota
CCT
Arg
>WENV182859406
OKOM01003266
144595
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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