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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182860566
OKOX01000017
147158
Actinomycetota
TTT
Lys
>WENV182860564
OKOX01000017
147155
Actinomycetota
GTC
Asp
>WENV182860568
OKOX01000017
237816
Actinomycetota
GGT
Thr
>WENV182860573
OKOX01000018
304559
Actinomycetota
GCC
Gly
>WENV182860627
OKOX01000063
37209
Actinomycetota
GAG
Leu
>WENV182860656
OKOX01000081
147157
Actinomycetota
TAC
Val
>WENV182860596
OKOX01000036
80900
Actinomycetota
TGA
Ser
>WENV182860575
OKOX01000018
339641
Actinomycetota
GAC
Val
>WENV182860666
OKOX01000098
428901
Actinomycetota
CCC
Gly
>WENV182860657
OKOX01000081
339640
Actinomycetota
CTG
Gln
>WENV182860598
OKOX01000036
289966
Actinomycetota
ACG
Arg
>WENV182860698
OKOX01000131
237815
Actinomycetota
CTT
Lys
>WENV182860589
OKOX01000032
237808
Actinomycetota
TGC
Ala
>WENV182860670
OKOX01000103
80899
Actinomycetota
CAG
Leu
>WENV182860565
OKOX01000017
147156
Actinomycetota
GAA
Phe
>WENV182860621
OKOX01000054
237804
Actinomycetota
TGT
Thr
>WENV182860569
OKOX01000017
338489
Actinomycetota
CAT
Met
>WENV182860654
OKOX01000077
237803
Actinomycetota
CGT
Thr
>WENV182860658
OKOX01000081
237812
Actinomycetota
CTC
Glu
>WENV182860599
OKOX01000036
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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