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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861018
OKPA01000087
338155
Bacteroidota
CTC
Glu
>WENV182861068
OKPA01000729
95618
Bacteroidota
TAG
Leu
>WENV182861029
OKPA01000134
235182
Bacteroidota
>WENV182861067
OKPA01000543
272983
Bacteroidota
CGT
Thr
>WENV182861041
OKPA01000201
338132
Bacteroidota
GCA
Cys
>WENV182861028
OKPA01000116
144688
Bacteroidota
CAT
Met
>WENV182861010
OKPA01000072
181746
Bacteroidota
GGC
Ala
>WENV182861048
OKPA01000256
301449
Bacteroidota
CGG
Pro
>WENV182861036
OKPA01000186
144933
Bacteroidota
TCT
Arg
>WENV182861044
OKPA01000216
235207
Bacteroidota
CAT
Met
>WENV182861035
OKPA01000160
80607
Bacteroidota
GTA
Tyr
>WENV182860992
OKPA01000038
139743
Bacteroidota
GGG
Pro
>WENV182861013
OKPA01000074
338165
Bacteroidota
GGT
Thr
>WENV182861019
OKPA01000094
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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