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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182862313
OKPL01000139
243647
Bacillota
TTT
Lys
>WENV182862305
OKPL01000090
16842
Bacillota
CGA
Ser
>WENV182862323
OKPL01000177
16834
Bacillota
GCT
Ser
>WENV182862265
OKPL01000011
114002
Bacillota
CAA
Leu
>WENV182862270
OKPL01000012
37437
Bacillota
TAA
Leu
>WENV182862315
OKPL01000139
243612
Bacillota
TAC
Val
>WENV182862348
OKPL01000359
147135
Bacillota
ACG
Arg
>WENV182862281
OKPL01000040
342895
Bacillota
CAT
Met
>WENV182862386
OKPL01002524
241471
Bacillota
TGC
Ala
>WENV182862267
OKPL01000012
250349
Bacillota
GAA
Phe
>WENV182862284
OKPL01000041
250349
Bacillota
GAA
Phe
>WENV182862266
OKPL01000012
235197
Bacillota
GTC
Asp
>WENV182862283
OKPL01000041
235197
Bacillota
GTC
Asp
>WENV182862268
OKPL01000012
368876
Bacillota
GCC
Gly
>WENV182862311
OKPL01000139
368876
Bacillota
GCC
Gly
>WENV182862342
OKPL01000301
243613
Bacillota
GTG
His
>WENV182862333
OKPL01000230
152491
Bacillota
CAT
Met
>WENV182862329
OKPL01000230
273029
Bacillota
TGT
Thr
>WENV182862332
OKPL01000230
281472
Bacillota
GGT
Thr
>WENV182862306
OKPL01000094
413657
Bacillota
CCC
Gly
>WENV182862312
OKPL01000139
287034
Bacillota
GTT
Asn
>WENV182862343
OKPL01000301
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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