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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182865213
OKQJ01000056
16842
Bacillota
CGA
Ser
>WENV182865439
OKQJ01007627
10560
Bacillota
GGA
Ser
>WENV182865432
OKQJ01005361
182834
Bacillota
GTC
Asp
>WENV182865433
OKQJ01005361
356488
Bacillota
TGT
Thr
>WENV182865347
OKQJ01000578
241441
Bacillota
GCC
Gly
>WENV182865357
OKQJ01000660
241441
Bacillota
GCC
Gly
>WENV182865409
OKQJ01001974
246023
Bacillota
TGC
Ala
>WENV182865155
OKQJ01000007
419288
Bacillota
GGT
Thr
>WENV182865374
OKQJ01001052
341763
Bacillota
CTC
Glu
>WENV182865227
OKQJ01000080
16834
Bacillota
GCT
Ser
>WENV182865402
OKQJ01001797
16834
Bacillota
GCT
Ser
>WENV182865217
OKQJ01000057
114002
Bacillota
CAA
Leu
>WENV182865233
OKQJ01000084
37437
Bacillota
TAA
Leu
>WENV182865293
OKQJ01000255
243612
Bacillota
TAC
Val
>WENV182865299
OKQJ01000263
413152
Bacillota
TCC
Gly
>WENV182865173
OKQJ01000012
28968
Bacillota
GGA
Ser
>WENV182865349
OKQJ01000617
147135
Bacillota
ACG
Arg
>WENV182865410
OKQJ01002023
342895
Bacillota
CAT
Met
>WENV182865230
OKQJ01000084
250349
Bacillota
GAA
Phe
>WENV182865244
OKQJ01000103
250349
Bacillota
GAA
Phe
>WENV182865229
OKQJ01000084
235197
Bacillota
GTC
Asp
>WENV182865243
OKQJ01000103
235197
Bacillota
GTC
Asp
>WENV182865231
OKQJ01000084
368876
Bacillota
GCC
Gly
>WENV182865318
OKQJ01000419
243613
Bacillota
GTG
His
>WENV182865434
OKQJ01005361
102996
Bacillota
GTA
Tyr
>WENV182865178
OKQJ01000014
148495
Bacillota
TCT
Arg
>WENV182865298
OKQJ01000255
152491
Bacillota
CAT
Met
>WENV182865294
OKQJ01000255
273029
Bacillota
TGT
Thr
>WENV182865297
OKQJ01000255
281472
Bacillota
GGT
Thr
>WENV182865216
OKQJ01000056
178024
Bacillota
TCT
Arg
>WENV182865247
OKQJ01000105
413657
Bacillota
CCC
Gly
>WENV182865437
OKQJ01005966
119513
Bacillota
CAA
Leu
>WENV182865319
OKQJ01000419
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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