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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182866642
OKRR01000733
235153
Actinomycetota
CCT
Arg
>WENV182867525
OKRR01047269
235194
Actinomycetota
GTG
His
>WENV182866849
OKRR01001884
245301
Actinomycetota
GCC
Gly
>WENV182866850
OKRR01001884
245301
Actinomycetota
GCC
Gly
>WENV182867492
OKRR01038737
23370
Actinomycetota
GCT
Ser
>WENV182867394
OKRR01019414
174149
Actinomycetota
GAT
Ile
>WENV182867395
OKRR01019414
235174
Actinomycetota
TGC
Ala
>WENV182867476
OKRR01035552
356045
Actinomycetota
GAC
Val
>WENV182867353
OKRR01014623
153948
Actinomycetota
GGG
Pro
>WENV182867473
OKRR01034528
44862
Actinomycetota
CGA
Ser
>WENV182867506
OKRR01042217
254857
Actinomycetota
CCG
Arg
>WENV182867413
OKRR01023113
144700
Actinomycetota
CAT
Met
>WENV182867127
OKRR01005414
144636
Actinomycetota
GAT
Ile
>WENV182867369
OKRR01017294
295695
Actinomycetota
CTC
Glu
>WENV182867370
OKRR01017294
338148
Actinomycetota
CTG
Gln
>WENV182867465
OKRR01031710
235148
Actinomycetota
GTT
Asn
>WENV182867444
OKRR01027633
53078
Actinomycetota
GGA
Ser
>WENV182866710
OKRR01000977
338139
Actinomycetota
GTT
Asn
>WENV182867523
OKRR01046928
144595
Actinomycetota
CAA
Leu
>WENV182867026
OKRR01003655
414234
Actinomycetota
CTG
Gln
>WENV182867000
OKRR01003118
158513
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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