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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182875666
OKRX01003082
235146
Actinomycetota
CGT
Thr
>WENV182875398
OKRX01000994
119475
Actinomycetota
TAA
Leu
>WENV182875529
OKRX01001806
235347
Actinomycetota
GGC
Ala
>WENV182876029
OKRX01010874
235153
Actinomycetota
CCT
Arg
>WENV182875134
OKRX01000213
144589
Actinomycetota
ACG
Arg
>WENV182875135
OKRX01000213
144589
Actinomycetota
ACG
Arg
>WENV182875692
OKRX01003423
16400
Actinomycetota
GAG
Leu
>WENV182875542
OKRX01001950
37070
Actinomycetota
CGA
Ser
>WENV182875531
OKRX01001835
201717
Actinomycetota
CTT
Lys
>WENV182875930
OKRX01007849
201717
Actinomycetota
CTT
Lys
>WENV182875467
OKRX01001389
144600
Actinomycetota
TGG
Pro
>WENV182875176
OKRX01000303
235092
Actinomycetota
CCG
Arg
>WENV182875338
OKRX01000805
158720
Actinomycetota
ACG
Arg
>WENV182875339
OKRX01000805
158720
Actinomycetota
ACG
Arg
>WENV182875834
OKRX01005650
245301
Actinomycetota
GCC
Gly
>WENV182875836
OKRX01005650
245301
Actinomycetota
GCC
Gly
>WENV182875837
OKRX01005650
245301
Actinomycetota
GCC
Gly
>WENV182875975
OKRX01008940
411601
Actinomycetota
CCC
Gly
>WENV182875046
OKRX01000041
144826
Actinomycetota
GGG
Pro
>WENV182875153
OKRX01000261
23370
Actinomycetota
GCT
Ser
>WENV182875188
OKRX01000339
338239
Actinomycetota
TTC
Glu
>WENV182875828
OKRX01005514
338239
Actinomycetota
TTC
Glu
>WENV182875191
OKRX01000347
16219
Actinomycetota
GCT
Ser
>WENV182875911
OKRX01007461
235174
Actinomycetota
TGC
Ala
>WENV182875552
OKRX01002034
235101
Actinomycetota
TTT
Lys
>WENV182875233
OKRX01000435
121510
Actinomycetota
TAA
Leu
>WENV182875709
OKRX01003625
356045
Actinomycetota
GAC
Val
>WENV182875335
OKRX01000784
153948
Actinomycetota
GGG
Pro
>WENV182875288
OKRX01000645
44855
Actinomycetota
TGA
Ser
>WENV182875070
OKRX01000092
145345
Actinomycetota
TAC
Val
>WENV182875838
OKRX01005672
145345
Actinomycetota
TAC
Val
>WENV182875710
OKRX01003625
235199
Actinomycetota
CAC
Val
>WENV182875410
OKRX01001038
44862
Actinomycetota
CGA
Ser
>WENV182875664
OKRX01003082
313386
Actinomycetota
CGT
Thr
>WENV182875528
OKRX01001806
413665
Actinomycetota
TTG
Gln
>WENV182875689
OKRX01003415
413665
Actinomycetota
TTG
Gln
>WENV182875585
OKRX01002327
254857
Actinomycetota
CCG
Arg
>WENV182875021
OKRX01000012
16223
Actinomycetota
GAG
Leu
>WENV182875355
OKRX01000858
144593
Actinomycetota
TAT
Ile
>WENV182876148
OKRX01018329
113703
Actinomycetota
TAG
Leu
>WENV182875152
OKRX01000261
144700
Actinomycetota
CAT
Met
>WENV182876209
OKRX01025540
144636
Actinomycetota
GAT
Ile
>WENV182875490
OKRX01001586
45147
Actinomycetota
CGA
Ser
>WENV182875090
OKRX01000141
295695
Actinomycetota
CTC
Glu
>WENV182875204
OKRX01000395
295695
Actinomycetota
CTC
Glu
>WENV182875719
OKRX01003747
295695
Actinomycetota
CTC
Glu
>WENV182875192
OKRX01000347
98279
Actinomycetota
GTA
Tyr
>WENV182875091
OKRX01000141
338148
Actinomycetota
CTG
Gln
>WENV182875205
OKRX01000395
338148
Actinomycetota
CTG
Gln
>WENV182875720
OKRX01003747
338148
Actinomycetota
CTG
Gln
>WENV182876151
OKRX01018505
235148
Actinomycetota
GTT
Asn
>WENV182875093
OKRX01000141
53078
Actinomycetota
GGA
Ser
>WENV182875494
OKRX01001601
237792
Actinomycetota
CCT
Arg
>WENV182875609
OKRX01002470
113702
Actinomycetota
TAA
Leu
>WENV182875691
OKRX01003422
176456
Actinomycetota
TCT
Arg
>WENV182875065
OKRX01000082
144825
Actinomycetota
CAT
Met
>WENV182876064
OKRX01012357
338139
Actinomycetota
GTT
Asn
>WENV182876065
OKRX01012357
338139
Actinomycetota
GTT
Asn
>WENV182875124
OKRX01000196
235348
Actinomycetota
CCT
Arg
>WENV182875879
OKRX01006598
237794
Actinomycetota
CCG
Arg
>WENV182875360
OKRX01000881
411554
Actinomycetota
CCC
Gly
>WENV182875716
OKRX01003700
411554
Actinomycetota
CCC
Gly
>WENV182876057
OKRX01011621
411554
Actinomycetota
CCC
Gly
>WENV182875665
OKRX01003082
113601
Actinomycetota
TAG
Leu
>WENV182876031
OKRX01010895
113601
Actinomycetota
TAG
Leu
>WENV182875051
OKRX01000054
144595
Actinomycetota
CAA
Leu
>WENV182875468
OKRX01001389
144595
Actinomycetota
CAA
Leu
>WENV182875506
OKRX01001696
144595
Actinomycetota
CAA
Leu
>WENV182875099
OKRX01000143
145343
Actinomycetota
GGG
Pro
>WENV182875315
OKRX01000741
235149
Actinomycetota
CCT
Arg
>WENV182875786
OKRX01004819
51286
Actinomycetota
TGA
Ser
>WENV182875484
OKRX01001512
414234
Actinomycetota
CTG
Gln
>WENV182875658
OKRX01003026
91808
Actinomycetota
CAG
Leu
>WENV182876030
OKRX01010895
235121
Actinomycetota
CGT
Thr
>WENV182876147
OKRX01018329
235121
Actinomycetota
CGT
Thr
>WENV182875052
OKRX01000054
144635
Actinomycetota
TGG
Pro
>WENV182875400
OKRX01001002
17009
Actinomycetota
GAG
Leu
>WENV182875359
OKRX01000881
80622
Actinomycetota
CAG
Leu
>WENV182875537
OKRX01001925
80622
Actinomycetota
CAG
Leu
>WENV182875548
OKRX01001981
44851
Actinomycetota
TGA
Ser
>WENV182875444
OKRX01001237
158513
Actinomycetota
TGG
Pro
>WENV182875582
OKRX01002313
163948
Actinomycetota
CAT
Met
>WENV182875835
OKRX01005650
412834
Actinomycetota
GCA
Cys
>WENV182875455
OKRX01001285
235173
Actinomycetota
GGC
Ala
>WENV182875495
OKRX01001609
235173
Actinomycetota
GGC
Ala
>WENV182875690
OKRX01003415
235173
Actinomycetota
GGC
Ala
>WENV182875912
OKRX01007461
235173
Actinomycetota
GGC
Ala
>WENV182875503
OKRX01001649
243162
Actinomycetota
GTT
Asn
>WENV182875618
OKRX01002567
243162
Actinomycetota
GTT
Asn
>WENV182875219
OKRX01000412
144660
Actinomycetota
TAC
Val
>WENV182875458
OKRX01001338
278447
Actinomycetota
GTG
His
>WENV182875044
OKRX01000041
267574
Actinomycetota
CAC
Val
>WENV182875454
OKRX01001285
267574
Actinomycetota
CAC
Val
>WENV182875151
OKRX01000261
95593
Actinomycetota
>WENV182875847
OKRX01005849
95593
Actinomycetota
>WENV182875154
OKRX01000264
144823
Actinomycetota
TCT
Arg
>WENV182875955
OKRX01008461
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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