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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182893483
OKSK01001735
196621
Bacillota
GTC
Asp
>WENV182893584
OKSK01003829
196621
Bacillota
GTC
Asp
>WENV182893379
OKSK01000782
309417
Bacillota
GGC
Ala
>WENV182893446
OKSK01001370
309417
Bacillota
GGC
Ala
>WENV182893382
OKSK01000796
144612
Bacillota
TCT
Arg
>WENV182893472
OKSK01001623
144612
Bacillota
TCT
Arg
>WENV182893247
OKSK01000097
267649
Bacillota
TAC
Val
>WENV182893404
OKSK01000915
235098
Bacillota
GAC
Val
>WENV182893491
OKSK01001822
235098
Bacillota
GAC
Val
>WENV182893568
OKSK01003323
235098
Bacillota
GAC
Val
>WENV182893649
OKSK01005829
235098
Bacillota
GAC
Val
>WENV182893458
OKSK01001491
338152
Bacillota
TTC
Glu
>WENV182893476
OKSK01001641
44854
Bacillota
TGA
Ser
>WENV182893165
OKSK01000007
37071
Bacillota
TGA
Ser
>WENV182893558
OKSK01003114
304022
Bacillota
GCC
Gly
>WENV182893187
OKSK01000017
59312
Bacillota
CAG
Leu
>WENV182893215
OKSK01000039
238910
Bacillota
CTT
Lys
>WENV182893212
OKSK01000037
338147
Bacillota
CTC
Glu
>WENV182893319
OKSK01000322
338147
Bacillota
CTC
Glu
>WENV182893334
OKSK01000378
338147
Bacillota
CTC
Glu
>WENV182893366
OKSK01000623
338147
Bacillota
CTC
Glu
>WENV182893702
OKSK01007832
293599
Bacillota
CTT
Lys
>WENV182893161
OKSK01000007
235114
Bacillota
TTT
Lys
>WENV182893447
OKSK01001408
429429
Bacillota
CCA
Trp
>WENV182893743
OKSK01010161
313454
Bacillota
GAA
Phe
>WENV182893597
OKSK01004095
41154
Bacillota
TAA
Leu
>WENV182893185
OKSK01000017
44859
Bacillota
AAG
Leu
>WENV182893186
OKSK01000017
44859
Bacillota
AAG
Leu
>WENV182893419
OKSK01001057
11034
Bacillota
GGA
Ser
>WENV182893660
OKSK01006224
11034
Bacillota
GGA
Ser
>WENV182893806
OKSK01016033
11034
Bacillota
GGA
Ser
>WENV182893183
OKSK01000016
274189
Bacillota
TGT
Thr
>WENV182893777
OKSK01012750
235079
Bacillota
GAA
Phe
>WENV182893752
OKSK01010668
173314
Bacillota
GAT
Ile
>WENV182893925
OKSK01042455
149041
Bacillota
GTC
Asp
>WENV182893351
OKSK01000456
245298
Bacillota
CGG
Pro
>WENV182893842
OKSK01019579
155089
Bacillota
CAT
Met
>WENV182893504
OKSK01002064
287000
Bacillota
GTT
Asn
>WENV182893812
OKSK01016806
152492
Bacillota
GGG
Pro
>WENV182893276
OKSK01000169
144610
Bacillota
GTG
His
>WENV182893350
OKSK01000456
411547
Bacillota
CTG
Gln
>WENV182893362
OKSK01000565
411547
Bacillota
CTG
Gln
>WENV182893692
OKSK01007536
411547
Bacillota
CTG
Gln
>WENV182893451
OKSK01001458
147684
Bacillota
ACG
Arg
>WENV182893477
OKSK01001641
4624
Bacillota
GCT
Ser
>WENV182893459
OKSK01001491
412387
Bacillota
GCA
Cys
>WENV182893541
OKSK01002719
412387
Bacillota
GCA
Cys
>WENV182893511
OKSK01002180
313164
Bacillota
TTT
Lys
>WENV182893243
OKSK01000085
235095
Bacillota
GGT
Thr
>WENV182893333
OKSK01000376
235095
Bacillota
GGT
Thr
>WENV182893484
OKSK01001735
235095
Bacillota
GGT
Thr
>WENV182893585
OKSK01003829
235095
Bacillota
GGT
Thr
>WENV182893923
OKSK01042455
239832
Bacillota
TGT
Thr
>WENV182893403
OKSK01000903
411549
Bacillota
TTG
Gln
>WENV182893496
OKSK01001943
411549
Bacillota
TTG
Gln
>WENV182893261
OKSK01000140
235142
Bacillota
CTT
Lys
>WENV182893285
OKSK01000190
235142
Bacillota
CTT
Lys
>WENV182893218
OKSK01000039
245386
Bacillota
CCA
Trp
>WENV182893417
OKSK01001028
148188
Bacillota
CCG
Arg
>WENV182893879
OKSK01025596
298639
Bacillota
GTT
Asn
>WENV182893680
OKSK01006638
80612
Bacillota
GTA
Tyr
>WENV182893721
OKSK01008828
163943
Bacillota
GTC
Asp
>WENV182893552
OKSK01002942
235124
Bacillota
TGG
Pro
>WENV182893728
OKSK01009051
235124
Bacillota
TGG
Pro
>WENV182893363
OKSK01000580
338129
Bacillota
TGT
Thr
>WENV182893399
OKSK01000883
338129
Bacillota
TGT
Thr
>WENV182893581
OKSK01003825
144583
Bacillota
ACG
Arg
>WENV182893269
OKSK01000169
144652
Bacillota
GTC
Asp
>WENV182893356
OKSK01000474
419877
Bacillota
TCC
Gly
>WENV182893583
OKSK01003829
235171
Bacillota
CCA
Trp
>WENV182893378
OKSK01000782
144621
Bacillota
GTT
Asn
>WENV182893160
OKSK01000007
235113
Bacillota
GAA
Phe
>WENV182893705
OKSK01007987
277200
Bacillota
GGC
Ala
>WENV182893868
OKSK01024278
243098
Bacillota
GGT
Thr
>WENV182893377
OKSK01000777
58712
Bacillota
CAG
Leu
>WENV182893575
OKSK01003553
245296
Bacillota
CCC
Gly
>WENV182893386
OKSK01000807
344240
Bacillota
GCC
Gly
>WENV182893384
OKSK01000807
196632
Bacillota
GTC
Asp
>WENV182893895
OKSK01030318
299139
Bacillota
TGC
Ala
>WENV182893435
OKSK01001212
144594
Bacillota
CAC
Val
>WENV182893600
OKSK01004295
144594
Bacillota
CAC
Val
>WENV182893684
OKSK01006702
144594
Bacillota
CAC
Val
>WENV182893252
OKSK01000105
95563
Bacillota
GTA
Tyr
>WENV182893337
OKSK01000385
338128
Bacillota
TTC
Glu
>WENV182893416
OKSK01001019
338128
Bacillota
TTC
Glu
>WENV182893385
OKSK01000807
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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