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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182893299
OKSK01000218
235102
Bacteroidota
CGT
Thr
>WENV182893519
OKSK01002372
144657
Bacteroidota
CGG
Pro
>WENV182893795
OKSK01014765
243025
Bacteroidota
CAT
Met
>WENV182893566
OKSK01003308
343138
Bacteroidota
CCT
Arg
>WENV182893530
OKSK01002473
95618
Bacteroidota
TAG
Leu
>WENV182893631
OKSK01005409
338486
Bacteroidota
CAT
Met
>WENV182893670
OKSK01006422
411543
Bacteroidota
CTG
Gln
>WENV182893740
OKSK01009967
411543
Bacteroidota
CTG
Gln
>WENV182893613
OKSK01004851
59689
Bacteroidota
CAG
Leu
>WENV182893259
OKSK01000137
436206
Bacteroidota
TTG
Gln
>WENV182893294
OKSK01000195
20893
Bacteroidota
GGA
Ser
>WENV182893344
OKSK01000435
338124
Bacteroidota
CCG
Arg
>WENV182893588
OKSK01003866
238121
Bacteroidota
CTT
Lys
>WENV182893589
OKSK01003866
238121
Bacteroidota
CTT
Lys
>WENV182893338
OKSK01000404
126641
Bacteroidota
TAC
Val
>WENV182893224
OKSK01000052
338132
Bacteroidota
GCA
Cys
>WENV182893310
OKSK01000268
338132
Bacteroidota
GCA
Cys
>WENV182893599
OKSK01004265
338132
Bacteroidota
GCA
Cys
>WENV182893421
OKSK01001085
45423
Bacteroidota
TGA
Ser
>WENV182893690
OKSK01007343
58714
Bacteroidota
CAA
Leu
>WENV182893295
OKSK01000203
280660
Bacteroidota
CCA
Trp
>WENV182893220
OKSK01000040
301449
Bacteroidota
CGG
Pro
>WENV182893400
OKSK01000896
144933
Bacteroidota
TCT
Arg
>WENV182893318
OKSK01000313
141414
Bacteroidota
GGG
Pro
>WENV182893256
OKSK01000129
144656
Bacteroidota
GTG
His
>WENV182893210
OKSK01000028
235207
Bacteroidota
CAT
Met
>WENV182893688
OKSK01006955
144659
Bacteroidota
GTG
His
>WENV182893456
OKSK01001482
144596
Bacteroidota
GGC
Ala
>WENV182893227
OKSK01000059
80607
Bacteroidota
GTA
Tyr
>WENV182893388
OKSK01000833
80607
Bacteroidota
GTA
Tyr
>WENV182893725
OKSK01008873
80614
Bacteroidota
>WENV182893679
OKSK01006623
154643
Bacteroidota
CAT
Met
>WENV182893250
OKSK01000100
144590
Bacteroidota
GTT
Asn
>WENV182893232
OKSK01000064
95559
Bacteroidota
TAG
Leu
>WENV182893279
OKSK01000173
144655
Bacteroidota
GGC
Ala
>WENV182893565
OKSK01003308
338164
Bacteroidota
TTC
Glu
>WENV182893545
OKSK01002785
95875
Bacteroidota
TAG
Leu
>WENV182893629
OKSK01005401
139743
Bacteroidota
GGG
Pro
>WENV182893790
OKSK01014244
240012
Bacteroidota
CCC
Gly
>WENV182893656
OKSK01005978
147439
Bacteroidota
TCT
Arg
>WENV182893681
OKSK01006653
411550
Bacteroidota
CTG
Gln
>WENV182893667
OKSK01006347
338165
Bacteroidota
GGT
Thr
>WENV182893253
OKSK01000118
425638
Bacteroidota
CTG
Gln
>WENV182893317
OKSK01000304
425638
Bacteroidota
CTG
Gln
>WENV182893479
OKSK01001700
425638
Bacteroidota
CTG
Gln
>WENV182893522
OKSK01002387
19317
Bacteroidota
GGA
Ser
>WENV182893792
OKSK01014262
353927
Bacteroidota
TTC
Glu
>WENV182893452
OKSK01001467
185921
Bacteroidota
GTC
Asp
>WENV182893808
OKSK01016599
414426
Bacteroidota
CTG
Gln
>WENV182893373
OKSK01000741
56823
Bacteroidota
TGA
Ser
>WENV182893544
OKSK01002775
56823
Bacteroidota
TGA
Ser
>WENV182893236
OKSK01000070
16220
Bacteroidota
GGA
Ser
>WENV182893158
OKSK01000002
338125
Bacteroidota
CCT
Arg
>WENV182893267
OKSK01000166
235129
Bacteroidota
GCC
Gly
>WENV182893424
OKSK01001111
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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