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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182896370
OKSN01022406
119661
Verrucomicrobiota
CAA
Leu
>WENV182896354
OKSN01019595
155256
Verrucomicrobiota
TCT
Arg
>WENV182896236
OKSN01009409
246701
Verrucomicrobiota
TTT
Lys
>WENV182896397
OKSN01025661
345141
Verrucomicrobiota
TTG
Gln
>WENV182896461
OKSN01042946
345133
Verrucomicrobiota
GAC
Val
>WENV182896442
OKSN01036943
155264
Verrucomicrobiota
GGG
Pro
>WENV182896408
OKSN01027658
344845
Verrucomicrobiota
CTG
Gln
>WENV182896424
OKSN01032936
128202
Verrucomicrobiota
GTC
Asp
>WENV182896367
OKSN01021803
414625
Verrucomicrobiota
CCC
Gly
>WENV182896470
OKSN01046541
97755
Verrucomicrobiota
TAG
Leu
>WENV182896366
OKSN01021803
419909
Verrucomicrobiota
TCC
Gly
>WENV182896336
OKSN01017511
344841
Verrucomicrobiota
CAC
Val
>WENV182895989
OKSN01002644
405704
Verrucomicrobiota
GCC
Gly
>WENV182896459
OKSN01041950
60880
Verrucomicrobiota
CAG
Leu
>WENV182896301
OKSN01014242
170105
Verrucomicrobiota
CAT
Met
>WENV182896255
OKSN01010726
344839
Verrucomicrobiota
GTG
His
>WENV182896371
OKSN01022528
17023
Verrucomicrobiota
GGA
Ser
>WENV182896377
OKSN01023301
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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