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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182907683
OKTF01000361
235097
Bacteroidota
TTT
Lys
>WENV182907824
OKTF01001075
235097
Bacteroidota
TTT
Lys
>WENV182907995
OKTF01003813
235097
Bacteroidota
TTT
Lys
>WENV182907854
OKTF01001344
235102
Bacteroidota
CGT
Thr
>WENV182908180
OKTF01022246
267954
Bacteroidota
GCC
Gly
>WENV182907904
OKTF01002017
144657
Bacteroidota
CGG
Pro
>WENV182907644
OKTF01000284
243025
Bacteroidota
CAT
Met
>WENV182907596
OKTF01000169
343138
Bacteroidota
CCT
Arg
>WENV182907716
OKTF01000453
58715
Bacteroidota
GAG
Leu
>WENV182907728
OKTF01000475
46165
Bacteroidota
TGA
Ser
>WENV182907601
OKTF01000179
338486
Bacteroidota
CAT
Met
>WENV182907925
OKTF01002254
338486
Bacteroidota
CAT
Met
>WENV182907789
OKTF01000839
59689
Bacteroidota
CAG
Leu
>WENV182907831
OKTF01001127
436206
Bacteroidota
TTG
Gln
>WENV182907851
OKTF01001310
20893
Bacteroidota
GGA
Ser
>WENV182907548
OKTF01000074
338124
Bacteroidota
CCG
Arg
>WENV182907616
OKTF01000219
338124
Bacteroidota
CCG
Arg
>WENV182907727
OKTF01000475
238121
Bacteroidota
CTT
Lys
>WENV182908177
OKTF01020992
126641
Bacteroidota
TAC
Val
>WENV182907608
OKTF01000193
338132
Bacteroidota
GCA
Cys
>WENV182907612
OKTF01000205
338132
Bacteroidota
GCA
Cys
>WENV182907805
OKTF01000935
338132
Bacteroidota
GCA
Cys
>WENV182907977
OKTF01003473
338132
Bacteroidota
GCA
Cys
>WENV182907589
OKTF01000163
58714
Bacteroidota
CAA
Leu
>WENV182907655
OKTF01000309
301449
Bacteroidota
CGG
Pro
>WENV182908008
OKTF01004154
301449
Bacteroidota
CGG
Pro
>WENV182908273
OKTF01053480
144933
Bacteroidota
TCT
Arg
>WENV182907847
OKTF01001264
144656
Bacteroidota
GTG
His
>WENV182907562
OKTF01000103
235207
Bacteroidota
CAT
Met
>WENV182907549
OKTF01000076
144659
Bacteroidota
GTG
His
>WENV182907905
OKTF01002017
235180
Bacteroidota
CCA
Trp
>WENV182908145
OKTF01013724
144596
Bacteroidota
GGC
Ala
>WENV182907637
OKTF01000277
80607
Bacteroidota
GTA
Tyr
>WENV182907741
OKTF01000563
80607
Bacteroidota
GTA
Tyr
>WENV182907862
OKTF01001405
80607
Bacteroidota
GTA
Tyr
>WENV182907550
OKTF01000076
80614
Bacteroidota
>WENV182907473
OKTF01000014
154643
Bacteroidota
CAT
Met
>WENV182907623
OKTF01000239
95559
Bacteroidota
TAG
Leu
>WENV182907464
OKTF01000010
144655
Bacteroidota
GGC
Ala
>WENV182907597
OKTF01000169
338164
Bacteroidota
TTC
Glu
>WENV182907554
OKTF01000089
95875
Bacteroidota
TAG
Leu
>WENV182907729
OKTF01000480
139743
Bacteroidota
GGG
Pro
>WENV182907779
OKTF01000742
240012
Bacteroidota
CCC
Gly
>WENV182907566
OKTF01000112
44852
Bacteroidota
TAA
Leu
>WENV182907666
OKTF01000333
147439
Bacteroidota
TCT
Arg
>WENV182908001
OKTF01003922
150485
Bacteroidota
GTT
Asn
>WENV182907531
OKTF01000060
411550
Bacteroidota
CTG
Gln
>WENV182907584
OKTF01000154
425638
Bacteroidota
CTG
Gln
>WENV182907801
OKTF01000899
425638
Bacteroidota
CTG
Gln
>WENV182907759
OKTF01000646
19317
Bacteroidota
GGA
Ser
>WENV182907530
OKTF01000058
353927
Bacteroidota
TTC
Glu
>WENV182907587
OKTF01000161
185921
Bacteroidota
GTC
Asp
>WENV182907614
OKTF01000205
23696
Bacteroidota
GCT
Ser
>WENV182907746
OKTF01000583
414426
Bacteroidota
CTG
Gln
>WENV182907747
OKTF01000584
56823
Bacteroidota
TGA
Ser
>WENV182907827
OKTF01001087
16224
Bacteroidota
GGA
Ser
>WENV182907897
OKTF01001855
16220
Bacteroidota
GGA
Ser
>WENV182907558
OKTF01000096
338125
Bacteroidota
CCT
Arg
>WENV182907832
OKTF01001131
338125
Bacteroidota
CCT
Arg
>WENV182907640
OKTF01000280
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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