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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182916662
OKTT01015119
267954
Bacteroidota
GCC
Gly
>WENV182916138
OKTT01000131
243025
Bacteroidota
CAT
Met
>WENV182916321
OKTT01001109
338155
Bacteroidota
CTC
Glu
>WENV182916813
OKTT01047318
153993
Bacteroidota
GAT
Ile
>WENV182916028
OKTT01000003
343138
Bacteroidota
CCT
Arg
>WENV182916452
OKTT01003527
46165
Bacteroidota
TGA
Ser
>WENV182916464
OKTT01003974
46165
Bacteroidota
TGA
Ser
>WENV182916343
OKTT01001313
17323
Bacteroidota
GGA
Ser
>WENV182916208
OKTT01000296
95618
Bacteroidota
TAG
Leu
>WENV182916706
OKTT01021966
95618
Bacteroidota
TAG
Leu
>WENV182916637
OKTT01012192
338486
Bacteroidota
CAT
Met
>WENV182916082
OKTT01000047
411543
Bacteroidota
CTG
Gln
>WENV182916197
OKTT01000259
411543
Bacteroidota
CTG
Gln
>WENV182916242
OKTT01000429
436206
Bacteroidota
TTG
Gln
>WENV182916388
OKTT01002190
20893
Bacteroidota
GGA
Ser
>WENV182916451
OKTT01003527
344692
Bacteroidota
GGT
Thr
>WENV182916072
OKTT01000030
146800
Bacteroidota
>WENV182916264
OKTT01000599
338132
Bacteroidota
GCA
Cys
>WENV182916351
OKTT01001437
144688
Bacteroidota
CAT
Met
>WENV182916320
OKTT01001108
181746
Bacteroidota
GGC
Ala
>WENV182916283
OKTT01000756
58714
Bacteroidota
CAA
Leu
>WENV182916050
OKTT01000017
301449
Bacteroidota
CGG
Pro
>WENV182916121
OKTT01000097
301449
Bacteroidota
CGG
Pro
>WENV182916359
OKTT01001591
301449
Bacteroidota
CGG
Pro
>WENV182916206
OKTT01000288
144933
Bacteroidota
TCT
Arg
>WENV182916506
OKTT01005629
144933
Bacteroidota
TCT
Arg
>WENV182916313
OKTT01001023
235207
Bacteroidota
CAT
Met
>WENV182916179
OKTT01000215
154643
Bacteroidota
CAT
Met
>WENV182916619
OKTT01011048
154643
Bacteroidota
CAT
Met
>WENV182916435
OKTT01003086
175704
Bacteroidota
TGC
Ala
>WENV182916515
OKTT01005864
338164
Bacteroidota
TTC
Glu
>WENV182916475
OKTT01004421
95875
Bacteroidota
TAG
Leu
>WENV182916702
OKTT01021094
338314
Bacteroidota
CCT
Arg
>WENV182916085
OKTT01000049
139743
Bacteroidota
GGG
Pro
>WENV182916205
OKTT01000283
139743
Bacteroidota
GGG
Pro
>WENV182916518
OKTT01005973
139743
Bacteroidota
GGG
Pro
>WENV182916772
OKTT01034748
147439
Bacteroidota
TCT
Arg
>WENV182916719
OKTT01023492
280513
Bacteroidota
TTT
Lys
>WENV182916037
OKTT01000005
425638
Bacteroidota
CTG
Gln
>WENV182916340
OKTT01001283
425638
Bacteroidota
CTG
Gln
>WENV182916360
OKTT01001593
425638
Bacteroidota
CTG
Gln
>WENV182916137
OKTT01000130
239647
Bacteroidota
TTT
Lys
>WENV182916383
OKTT01002131
239647
Bacteroidota
TTT
Lys
>WENV182916356
OKTT01001507
19317
Bacteroidota
GGA
Ser
>WENV182916175
OKTT01000204
353927
Bacteroidota
TTC
Glu
>WENV182916614
OKTT01010848
353927
Bacteroidota
TTC
Glu
>WENV182916361
OKTT01001651
185921
Bacteroidota
GTC
Asp
>WENV182916603
OKTT01010213
146530
Bacteroidota
TGT
Thr
>WENV182916309
OKTT01000976
139062
Bacteroidota
TGG
Pro
>WENV182916474
OKTT01004382
23696
Bacteroidota
GCT
Ser
>WENV182916378
OKTT01002070
414426
Bacteroidota
CTG
Gln
>WENV182916151
OKTT01000153
55270
Bacteroidota
TGA
Ser
>WENV182916203
OKTT01000264
55270
Bacteroidota
TGA
Ser
>WENV182916469
OKTT01004172
151960
Bacteroidota
GGC
Ala
>WENV182916665
OKTT01015372
235129
Bacteroidota
GCC
Gly
>WENV182916150
OKTT01000149
411629
Bacteroidota
TTG
Gln
>WENV182916294
OKTT01000843
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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