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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182917208
OKTU01003828
196621
Bacillota
GTC
Asp
>WENV182916975
OKTU01000420
144612
Bacillota
TCT
Arg
>WENV182917106
OKTU01001494
144612
Bacillota
TCT
Arg
>WENV182916999
OKTU01000561
267649
Bacillota
TAC
Val
>WENV182917365
OKTU01008375
267649
Bacillota
TAC
Val
>WENV182916988
OKTU01000468
235098
Bacillota
GAC
Val
>WENV182917030
OKTU01000778
235098
Bacillota
GAC
Val
>WENV182917053
OKTU01000880
235098
Bacillota
GAC
Val
>WENV182917114
OKTU01001551
235098
Bacillota
GAC
Val
>WENV182917509
OKTU01021503
338152
Bacillota
TTC
Glu
>WENV182917075
OKTU01001092
44854
Bacillota
TGA
Ser
>WENV182917508
OKTU01021503
235154
Bacillota
GTT
Asn
>WENV182916847
OKTU01000025
37071
Bacillota
TGA
Ser
>WENV182917485
OKTU01018521
59312
Bacillota
CAG
Leu
>WENV182916872
OKTU01000085
238910
Bacillota
CTT
Lys
>WENV182916836
OKTU01000012
338147
Bacillota
CTC
Glu
>WENV182916838
OKTU01000016
338147
Bacillota
CTC
Glu
>WENV182916959
OKTU01000317
338147
Bacillota
CTC
Glu
>WENV182917021
OKTU01000690
338147
Bacillota
CTC
Glu
>WENV182917335
OKTU01007243
340802
Bacillota
TTG
Gln
>WENV182917218
OKTU01004065
293599
Bacillota
CTT
Lys
>WENV182917372
OKTU01008780
235114
Bacillota
TTT
Lys
>WENV182917219
OKTU01004100
144668
Bacillota
GTC
Asp
>WENV182916891
OKTU01000108
429429
Bacillota
CCA
Trp
>WENV182917184
OKTU01003042
429429
Bacillota
CCA
Trp
>WENV182917220
OKTU01004100
41154
Bacillota
TAA
Leu
>WENV182916916
OKTU01000199
44859
Bacillota
AAG
Leu
>WENV182916917
OKTU01000199
44859
Bacillota
AAG
Leu
>WENV182917155
OKTU01002435
11034
Bacillota
GGA
Ser
>WENV182917258
OKTU01004790
11034
Bacillota
GGA
Ser
>WENV182917289
OKTU01005426
11034
Bacillota
GGA
Ser
>WENV182917384
OKTU01009216
235079
Bacillota
GAA
Phe
>WENV182917420
OKTU01011246
173314
Bacillota
GAT
Ile
>WENV182917048
OKTU01000820
338149
Bacillota
CTC
Glu
>WENV182917256
OKTU01004780
338149
Bacillota
CTC
Glu
>WENV182916884
OKTU01000094
271471
Bacillota
GCC
Gly
>WENV182916938
OKTU01000266
245298
Bacillota
CGG
Pro
>WENV182917446
OKTU01013317
37269
Bacillota
TGA
Ser
>WENV182917341
OKTU01007507
287000
Bacillota
GTT
Asn
>WENV182917520
OKTU01024440
162445
Bacillota
CAT
Met
>WENV182917435
OKTU01012210
152492
Bacillota
GGG
Pro
>WENV182916937
OKTU01000266
411547
Bacillota
CTG
Gln
>WENV182917024
OKTU01000704
411547
Bacillota
CTG
Gln
>WENV182917255
OKTU01004764
147684
Bacillota
ACG
Arg
>WENV182917076
OKTU01001092
4624
Bacillota
GCT
Ser
>WENV182916882
OKTU01000094
263765
Bacillota
TAC
Val
>WENV182917183
OKTU01003010
412387
Bacillota
GCA
Cys
>WENV182917510
OKTU01021503
412387
Bacillota
GCA
Cys
>WENV182917186
OKTU01003084
18852
Bacillota
GCT
Ser
>WENV182917108
OKTU01001503
235095
Bacillota
GGT
Thr
>WENV182917129
OKTU01001851
235095
Bacillota
GGT
Thr
>WENV182917209
OKTU01003828
235095
Bacillota
GGT
Thr
>WENV182917153
OKTU01002432
419639
Bacillota
GCA
Cys
>WENV182917072
OKTU01001043
411549
Bacillota
TTG
Gln
>WENV182917198
OKTU01003449
411549
Bacillota
TTG
Gln
>WENV182916855
OKTU01000030
235142
Bacillota
CTT
Lys
>WENV182916912
OKTU01000191
235142
Bacillota
CTT
Lys
>WENV182916875
OKTU01000085
245386
Bacillota
CCA
Trp
>WENV182917010
OKTU01000583
148188
Bacillota
CCG
Arg
>WENV182917311
OKTU01006006
148188
Bacillota
CCG
Arg
>WENV182917391
OKTU01009523
148188
Bacillota
CCG
Arg
>WENV182917254
OKTU01004728
80612
Bacillota
GTA
Tyr
>WENV182917346
OKTU01007683
163943
Bacillota
GTC
Asp
>WENV182916892
OKTU01000117
235124
Bacillota
TGG
Pro
>WENV182917252
OKTU01004701
235124
Bacillota
TGG
Pro
>WENV182917555
OKTU01028610
338129
Bacillota
TGT
Thr
>WENV182917044
OKTU01000799
144583
Bacillota
ACG
Arg
>WENV182917143
OKTU01002290
419877
Bacillota
TCC
Gly
>WENV182917207
OKTU01003828
235171
Bacillota
CCA
Trp
>WENV182917049
OKTU01000820
144621
Bacillota
GTT
Asn
>WENV182917257
OKTU01004780
144621
Bacillota
GTT
Asn
>WENV182917281
OKTU01005280
144621
Bacillota
GTT
Asn
>WENV182916844
OKTU01000025
235113
Bacillota
GAA
Phe
>WENV182917058
OKTU01000899
243098
Bacillota
GGT
Thr
>WENV182917137
OKTU01002056
58712
Bacillota
CAG
Leu
>WENV182917081
OKTU01001107
245296
Bacillota
CCC
Gly
>WENV182917162
OKTU01002559
344240
Bacillota
GCC
Gly
>WENV182917101
OKTU01001464
196632
Bacillota
GTC
Asp
>WENV182917563
OKTU01030057
299139
Bacillota
TGC
Ala
>WENV182917009
OKTU01000576
144594
Bacillota
CAC
Val
>WENV182917121
OKTU01001652
144594
Bacillota
CAC
Val
>WENV182916889
OKTU01000103
95563
Bacillota
GTA
Tyr
>WENV182917267
OKTU01004902
272488
Bacillota
GAA
Phe
>WENV182917111
OKTU01001538
338128
Bacillota
TTC
Glu
>WENV182917160
OKTU01002540
338128
Bacillota
TTC
Glu
>WENV182917102
OKTU01001464
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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