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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182929757
OKUQ01005502
119661
Verrucomicrobiota
CAA
Leu
>WENV182930116
OKUQ01032264
155256
Verrucomicrobiota
TCT
Arg
>WENV182929419
OKUQ01000905
246701
Verrucomicrobiota
TTT
Lys
>WENV182929770
OKUQ01006014
345141
Verrucomicrobiota
TTG
Gln
>WENV182929849
OKUQ01008053
345133
Verrucomicrobiota
GAC
Val
>WENV182929617
OKUQ01002813
82054
Verrucomicrobiota
GTA
Tyr
>WENV182929704
OKUQ01004404
344845
Verrucomicrobiota
CTG
Gln
>WENV182929614
OKUQ01002731
128202
Verrucomicrobiota
GTC
Asp
>WENV182929914
OKUQ01011234
414625
Verrucomicrobiota
CCC
Gly
>WENV182930051
OKUQ01023418
46246
Verrucomicrobiota
TGA
Ser
>WENV182929942
OKUQ01013075
97755
Verrucomicrobiota
TAG
Leu
>WENV182929834
OKUQ01007468
246700
Verrucomicrobiota
TTC
Glu
>WENV182929915
OKUQ01011234
419909
Verrucomicrobiota
TCC
Gly
>WENV182930052
OKUQ01023682
170105
Verrucomicrobiota
CAT
Met
>WENV182929863
OKUQ01008742
287733
Verrucomicrobiota
CCA
Trp
>WENV182929790
OKUQ01006402
344839
Verrucomicrobiota
GTG
His
>WENV182930003
OKUQ01017789
7274
Verrucomicrobiota
CGA
Ser
>WENV182929894
OKUQ01010168
155268
Verrucomicrobiota
CGG
Pro
>WENV182930127
OKUQ01034275
82181
Verrucomicrobiota
AAG
Leu
>WENV182929976
OKUQ01015396
7256
Verrucomicrobiota
GCT
Ser
>WENV182930103
OKUQ01031005
345115
Verrucomicrobiota
CAT
Met
>WENV182929714
OKUQ01004754
345119
Verrucomicrobiota
TAC
Val
>WENV182929803
OKUQ01006581
345124
Verrucomicrobiota
GTT
Asn
>WENV182929660
OKUQ01003515
368497
Verrucomicrobiota
GCC
Gly
>WENV182929659
OKUQ01003508
345142
Verrucomicrobiota
CCG
Arg
>WENV182929791
OKUQ01006402
246709
Verrucomicrobiota
CAT
Met
>WENV182930013
OKUQ01018587
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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