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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182930692
OKUR01006687
339412
Bacteroidota
GGT
Thr
>WENV182930620
OKUR01003603
235102
Bacteroidota
CGT
Thr
>WENV182930584
OKUR01002824
237796
Bacteroidota
CGT
Thr
>WENV182930633
OKUR01004137
415410
Bacteroidota
TTG
Gln
>WENV182930590
OKUR01002992
147147
Bacteroidota
GTG
His
>WENV182930491
OKUR01001132
155123
Bacteroidota
GTT
Asn
>WENV182930939
OKUR01034103
338132
Bacteroidota
GCA
Cys
>WENV182930895
OKUR01026047
235207
Bacteroidota
CAT
Met
>WENV182931027
OKUR01059480
80607
Bacteroidota
GTA
Tyr
>WENV182930685
OKUR01006491
412235
Bacteroidota
>WENV182930807
OKUR01016046
95559
Bacteroidota
TAG
Leu
>WENV182930748
OKUR01009275
144655
Bacteroidota
GGC
Ala
>WENV182931022
OKUR01058053
167013
Bacteroidota
TGG
Pro
>WENV182930691
OKUR01006687
95986
Bacteroidota
GTA
Tyr
>WENV182930896
OKUR01026127
353927
Bacteroidota
TTC
Glu
>WENV182930626
OKUR01003817
146764
Bacteroidota
GTC
Asp
>WENV182930627
OKUR01003817
146764
Bacteroidota
GTC
Asp
>WENV182930409
OKUR01000461
127023
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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