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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182936124
OKVA01029825
235146
Actinomycetota
CGT
Thr
>WENV182935941
OKVA01006595
119475
Actinomycetota
TAA
Leu
>WENV182935940
OKVA01006582
235153
Actinomycetota
CCT
Arg
>WENV182936044
OKVA01015745
144589
Actinomycetota
ACG
Arg
>WENV182936116
OKVA01028604
37070
Actinomycetota
CGA
Ser
>WENV182936163
OKVA01045098
235092
Actinomycetota
CCG
Arg
>WENV182935864
OKVA01003557
162208
Actinomycetota
TAC
Val
>WENV182935989
OKVA01009750
16219
Actinomycetota
GCT
Ser
>WENV182936003
OKVA01011487
235174
Actinomycetota
TGC
Ala
>WENV182935870
OKVA01003834
235101
Actinomycetota
TTT
Lys
>WENV182935927
OKVA01006348
16223
Actinomycetota
GAG
Leu
>WENV182935787
OKVA01001604
144636
Actinomycetota
GAT
Ile
>WENV182935791
OKVA01001687
338148
Actinomycetota
CTG
Gln
>WENV182935990
OKVA01009941
235148
Actinomycetota
GTT
Asn
>WENV182935977
OKVA01008973
338139
Actinomycetota
GTT
Asn
>WENV182935882
OKVA01004217
411554
Actinomycetota
CCC
Gly
>WENV182936052
OKVA01017606
113601
Actinomycetota
TAG
Leu
>WENV182936001
OKVA01011468
144595
Actinomycetota
CAA
Leu
>WENV182935654
OKVA01000281
414234
Actinomycetota
CTG
Gln
>WENV182935816
OKVA01002182
61501
Actinomycetota
CAG
Leu
>WENV182935869
OKVA01003778
80622
Actinomycetota
CAG
Leu
>WENV182935994
OKVA01010760
44851
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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