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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182936515
OKVB01001590
119475
Actinomycetota
TAA
Leu
>WENV182936775
OKVB01013357
166493
Actinomycetota
CTT
Lys
>WENV182936464
OKVB01000978
235153
Actinomycetota
CCT
Arg
>WENV182936741
OKVB01009831
144589
Actinomycetota
ACG
Arg
>WENV182936524
OKVB01001694
37070
Actinomycetota
CGA
Ser
>WENV182936965
OKVB01047704
235092
Actinomycetota
CCG
Arg
>WENV182936862
OKVB01023273
245301
Actinomycetota
GCC
Gly
>WENV182936454
OKVB01000881
23370
Actinomycetota
GCT
Ser
>WENV182936787
OKVB01014195
162208
Actinomycetota
TAC
Val
>WENV182936443
OKVB01000748
235174
Actinomycetota
TGC
Ala
>WENV182936648
OKVB01004475
235101
Actinomycetota
TTT
Lys
>WENV182936438
OKVB01000740
144625
Actinomycetota
GTC
Asp
>WENV182936557
OKVB01002417
153948
Actinomycetota
GGG
Pro
>WENV182936475
OKVB01001075
16223
Actinomycetota
GAG
Leu
>WENV182936652
OKVB01004669
144593
Actinomycetota
TAT
Ile
>WENV182936401
OKVB01000426
144636
Actinomycetota
GAT
Ile
>WENV182936703
OKVB01007271
98279
Actinomycetota
GTA
Tyr
>WENV182936564
OKVB01002490
338148
Actinomycetota
CTG
Gln
>WENV182936729
OKVB01008932
235148
Actinomycetota
GTT
Asn
>WENV182936545
OKVB01002032
176456
Actinomycetota
TCT
Arg
>WENV182936434
OKVB01000718
411554
Actinomycetota
CCC
Gly
>WENV182936569
OKVB01002712
113601
Actinomycetota
TAG
Leu
>WENV182936774
OKVB01012792
144595
Actinomycetota
CAA
Leu
>WENV182936677
OKVB01006197
145343
Actinomycetota
GGG
Pro
>WENV182936603
OKVB01003153
235149
Actinomycetota
CCT
Arg
>WENV182936546
OKVB01002102
414234
Actinomycetota
CTG
Gln
>WENV182936568
OKVB01002712
235121
Actinomycetota
CGT
Thr
>WENV182936601
OKVB01003105
61501
Actinomycetota
CAG
Leu
>WENV182936435
OKVB01000718
80622
Actinomycetota
CAG
Leu
>WENV182936671
OKVB01005120
44851
Actinomycetota
TGA
Ser
>WENV182936573
OKVB01002779
158513
Actinomycetota
TGG
Pro
>WENV182936444
OKVB01000748
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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