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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182936786
OKVB01014165
235097
Bacteroidota
TTT
Lys
>WENV182936879
OKVB01025812
235102
Bacteroidota
CGT
Thr
>WENV182936740
OKVB01009667
267954
Bacteroidota
GCC
Gly
>WENV182936919
OKVB01033787
413663
Bacteroidota
CTG
Gln
>WENV182936963
OKVB01046791
146800
Bacteroidota
>WENV182936612
OKVB01003544
144656
Bacteroidota
GTG
His
>WENV182936846
OKVB01020255
235207
Bacteroidota
CAT
Met
>WENV182936852
OKVB01020727
113604
Bacteroidota
>WENV182936916
OKVB01033431
154643
Bacteroidota
CAT
Met
>WENV182936718
OKVB01008433
144590
Bacteroidota
GTT
Asn
>WENV182936649
OKVB01004530
132360
Bacteroidota
GGG
Pro
>WENV182936757
OKVB01011031
16220
Bacteroidota
GGA
Ser
>WENV182936635
OKVB01004263
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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