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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182948688
OKVP01001508
95987
Bacteroidota
CAA
Leu
>WENV182949387
OKVP01042828
267954
Bacteroidota
GCC
Gly
>WENV182949542
OKVP01067214
136244
Bacteroidota
TAC
Val
>WENV182948869
OKVP01005014
128251
Bacteroidota
TGG
Pro
>WENV182948973
OKVP01008810
155123
Bacteroidota
GTT
Asn
>WENV182949122
OKVP01017361
235203
Bacteroidota
TTT
Lys
>WENV182949532
OKVP01064488
301449
Bacteroidota
CGG
Pro
>WENV182948921
OKVP01006464
303954
Bacteroidota
GCC
Gly
>WENV182949167
OKVP01021211
136207
Bacteroidota
TAC
Val
>WENV182949227
OKVP01026453
113604
Bacteroidota
>WENV182948640
OKVP01000961
52358
Bacteroidota
TGA
Ser
>WENV182948774
OKVP01002681
263771
Bacteroidota
CTT
Lys
>WENV182949559
OKVP01069786
139743
Bacteroidota
GGG
Pro
>WENV182949146
OKVP01019040
353927
Bacteroidota
TTC
Glu
>WENV182949550
OKVP01067872
353927
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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