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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182965914
OKWT01005729
81880
Gammaproteobacteria
GAG
Leu
>WENV182965666
OKWT01000029
144730
Gammaproteobacteria
CAT
Met
>WENV182965591
OKWT01000001
145364
Gammaproteobacteria
GGG
Pro
>WENV182965828
OKWT01000363
3276
Gammaproteobacteria
>WENV182965667
OKWT01000029
339937
Gammaproteobacteria
CTG
Gln
>WENV182965668
OKWT01000029
339937
Gammaproteobacteria
CTG
Gln
>WENV182965592
OKWT01000001
347111
Gammaproteobacteria
CCT
Arg
>WENV182965747
OKWT01000122
268376
Gammaproteobacteria
CTT
Lys
>WENV182965725
OKWT01000077
147761
Gammaproteobacteria
TGG
Pro
>WENV182965847
OKWT01000515
147761
Gammaproteobacteria
TGG
Pro
>WENV182965894
OKWT01001022
147761
Gammaproteobacteria
TGG
Pro
>WENV182965662
OKWT01000029
145421
Gammaproteobacteria
>WENV182965674
OKWT01000032
67703
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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