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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182969563
OKXB01038881
155113
Bacillota
CGG
Pro
>WENV182968046
OKXB01000727
267649
Bacillota
TAC
Val
>WENV182967558
OKXB01000035
267556
Bacillota
TAC
Val
>WENV182968207
OKXB01001124
267556
Bacillota
TAC
Val
>WENV182967554
OKXB01000035
339890
Bacillota
TTG
Gln
>WENV182969364
OKXB01020947
156189
Bacillota
GAT
Ile
>WENV182969165
OKXB01012995
235098
Bacillota
GAC
Val
>WENV182969410
OKXB01024611
338152
Bacillota
TTC
Glu
>WENV182968247
OKXB01001253
148239
Bacillota
TCT
Arg
>WENV182967652
OKXB01000091
37071
Bacillota
TGA
Ser
>WENV182967989
OKXB01000591
347827
Bacillota
TTC
Glu
>WENV182967632
OKXB01000076
59312
Bacillota
CAG
Leu
>WENV182967725
OKXB01000166
59312
Bacillota
CAG
Leu
>WENV182968661
OKXB01003816
238910
Bacillota
CTT
Lys
>WENV182969177
OKXB01013294
238910
Bacillota
CTT
Lys
>WENV182968547
OKXB01002825
245370
Bacillota
TGT
Thr
>WENV182968930
OKXB01007764
245370
Bacillota
TGT
Thr
>WENV182967562
OKXB01000041
338147
Bacillota
CTC
Glu
>WENV182967582
OKXB01000055
338147
Bacillota
CTC
Glu
>WENV182968293
OKXB01001440
338147
Bacillota
CTC
Glu
>WENV182969178
OKXB01013450
338147
Bacillota
CTC
Glu
>WENV182969523
OKXB01033833
235150
Bacillota
TGC
Ala
>WENV182968120
OKXB01000873
155273
Bacillota
CAT
Met
>WENV182968781
OKXB01005124
340802
Bacillota
TTG
Gln
>WENV182968024
OKXB01000640
177274
Bacillota
CAT
Met
>WENV182967940
OKXB01000480
235114
Bacillota
TTT
Lys
>WENV182967996
OKXB01000601
235114
Bacillota
TTT
Lys
>WENV182969475
OKXB01029601
182792
Bacillota
GTC
Asp
>WENV182967630
OKXB01000076
44859
Bacillota
AAG
Leu
>WENV182967631
OKXB01000076
44859
Bacillota
AAG
Leu
>WENV182969657
OKXB01051021
11034
Bacillota
GGA
Ser
>WENV182969474
OKXB01029601
235117
Bacillota
TAC
Val
>WENV182968248
OKXB01001253
156937
Bacillota
GTG
His
>WENV182969048
OKXB01009951
274189
Bacillota
TGT
Thr
>WENV182968433
OKXB01002056
235079
Bacillota
GAA
Phe
>WENV182968362
OKXB01001718
238853
Bacillota
TAC
Val
>WENV182969260
OKXB01015966
338149
Bacillota
CTC
Glu
>WENV182969519
OKXB01032986
245298
Bacillota
CGG
Pro
>WENV182969691
OKXB01056983
413152
Bacillota
TCC
Gly
>WENV182969478
OKXB01030177
162445
Bacillota
CAT
Met
>WENV182969138
OKXB01012266
152492
Bacillota
GGG
Pro
>WENV182968431
OKXB01002056
235078
Bacillota
TAC
Val
>WENV182969362
OKXB01020896
153911
Bacillota
GAT
Ile
>WENV182968205
OKXB01001109
100326
Bacillota
GTA
Tyr
>WENV182967994
OKXB01000601
144610
Bacillota
GTG
His
>WENV182969518
OKXB01032986
411547
Bacillota
CTG
Gln
>WENV182969431
OKXB01025777
4624
Bacillota
GCT
Ser
>WENV182968189
OKXB01001061
263765
Bacillota
TAC
Val
>WENV182968928
OKXB01007753
263765
Bacillota
TAC
Val
>WENV182968036
OKXB01000684
412387
Bacillota
GCA
Cys
>WENV182969438
OKXB01026576
18852
Bacillota
GCT
Ser
>WENV182969476
OKXB01029601
235095
Bacillota
GGT
Thr
>WENV182968796
OKXB01005334
419945
Bacillota
GCA
Cys
>WENV182969453
OKXB01028340
411549
Bacillota
TTG
Gln
>WENV182967729
OKXB01000176
235142
Bacillota
CTT
Lys
>WENV182968070
OKXB01000772
235142
Bacillota
CTT
Lys
>WENV182969670
OKXB01053149
148188
Bacillota
CCG
Arg
>WENV182969181
OKXB01013558
163943
Bacillota
GTC
Asp
>WENV182968959
OKXB01008426
241432
Bacillota
TGT
Thr
>WENV182968962
OKXB01008426
254433
Bacillota
TAC
Val
>WENV182969714
OKXB01061878
338129
Bacillota
TGT
Thr
>WENV182967597
OKXB01000063
157838
Bacillota
GTC
Asp
>WENV182968098
OKXB01000814
157838
Bacillota
GTC
Asp
>WENV182968174
OKXB01001044
157838
Bacillota
GTC
Asp
>WENV182967768
OKXB01000231
247734
Bacillota
TGC
Ala
>WENV182968203
OKXB01001109
238974
Bacillota
GAA
Phe
>WENV182968539
OKXB01002768
238974
Bacillota
GAA
Phe
>WENV182969261
OKXB01015966
144621
Bacillota
GTT
Asn
>WENV182967649
OKXB01000091
235113
Bacillota
GAA
Phe
>WENV182967939
OKXB01000480
235113
Bacillota
GAA
Phe
>WENV182968543
OKXB01002773
277200
Bacillota
GGC
Ala
>WENV182968837
OKXB01005926
277200
Bacillota
GGC
Ala
>WENV182968550
OKXB01002825
243098
Bacillota
GGT
Thr
>WENV182969190
OKXB01013755
58712
Bacillota
CAG
Leu
>WENV182968338
OKXB01001574
344240
Bacillota
GCC
Gly
>WENV182968734
OKXB01004684
344240
Bacillota
GCC
Gly
>WENV182968795
OKXB01005334
344240
Bacillota
GCC
Gly
>WENV182968851
OKXB01006111
344240
Bacillota
GCC
Gly
>WENV182968582
OKXB01003096
248965
Bacillota
GCC
Gly
>WENV182969264
OKXB01015977
248965
Bacillota
GCC
Gly
>WENV182967900
OKXB01000420
178024
Bacillota
TCT
Arg
>WENV182967777
OKXB01000243
95563
Bacillota
GTA
Tyr
>WENV182967526
OKXB01000017
338127
Bacillota
TTG
Gln
>WENV182969477
OKXB01029741
414486
Bacillota
CCC
Gly
>WENV182967983
OKXB01000582
272488
Bacillota
GAA
Phe
>WENV182968290
OKXB01001431
272488
Bacillota
GAA
Phe
>WENV182968698
OKXB01004214
272488
Bacillota
GAA
Phe
>WENV182969192
OKXB01013836
114075
Bacillota
TAG
Leu
>WENV182967962
OKXB01000530
238945
Bacillota
GCC
Gly
>WENV182967963
OKXB01000530
238945
Bacillota
GCC
Gly
>WENV182969303
OKXB01017521
338128
Bacillota
TTC
Glu
>WENV182969348
OKXB01020343
338128
Bacillota
TTC
Glu
>WENV182968794
OKXB01005334
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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