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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182969908
OKXC01000334
144612
Bacillota
TCT
Arg
>WENV182969917
OKXC01000477
235098
Bacillota
GAC
Val
>WENV182969924
OKXC01000664
235098
Bacillota
GAC
Val
>WENV182969927
OKXC01000745
44854
Bacillota
TGA
Ser
>WENV182970031
OKXC01010134
338147
Bacillota
CTC
Glu
>WENV182969998
OKXC01004818
340802
Bacillota
TTG
Gln
>WENV182969968
OKXC01002508
144668
Bacillota
GTC
Asp
>WENV182970005
OKXC01005737
44859
Bacillota
AAG
Leu
>WENV182969952
OKXC01001737
11034
Bacillota
GGA
Ser
>WENV182969941
OKXC01000928
245298
Bacillota
CGG
Pro
>WENV182970017
OKXC01006328
37269
Bacillota
TGA
Ser
>WENV182969997
OKXC01004818
144610
Bacillota
GTG
His
>WENV182969887
OKXC01000173
411547
Bacillota
CTG
Gln
>WENV182969940
OKXC01000928
411547
Bacillota
CTG
Gln
>WENV182969928
OKXC01000745
4624
Bacillota
GCT
Ser
>WENV182969897
OKXC01000240
235095
Bacillota
GGT
Thr
>WENV182969913
OKXC01000414
235095
Bacillota
GGT
Thr
>WENV182969907
OKXC01000332
411549
Bacillota
TTG
Gln
>WENV182969889
OKXC01000196
148188
Bacillota
CCG
Arg
>WENV182969916
OKXC01000476
148188
Bacillota
CCG
Arg
>WENV182969919
OKXC01000492
80612
Bacillota
GTA
Tyr
>WENV182969918
OKXC01000485
235124
Bacillota
TGG
Pro
>WENV182969960
OKXC01002301
338129
Bacillota
TGT
Thr
>WENV182970044
OKXC01011913
235171
Bacillota
CCA
Trp
>WENV182969959
OKXC01002100
58712
Bacillota
CAG
Leu
>WENV182969921
OKXC01000539
245296
Bacillota
CCC
Gly
>WENV182969891
OKXC01000203
272992
Bacillota
CTT
Lys
>WENV182969996
OKXC01004818
157635
Bacillota
TCT
Arg
>WENV182969912
OKXC01000368
144594
Bacillota
CAC
Val
>WENV182969983
OKXC01003398
338128
Bacillota
TTC
Glu
>WENV182970029
OKXC01008982
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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