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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182970937
OKXG01000120
235102
Bacteroidota
CGT
Thr
>WENV182971152
OKXG01016191
243025
Bacteroidota
CAT
Met
>WENV182971061
OKXG01004312
338155
Bacteroidota
CTC
Glu
>WENV182970923
OKXG01000079
436206
Bacteroidota
TTG
Gln
>WENV182970896
OKXG01000039
338124
Bacteroidota
CCG
Arg
>WENV182970966
OKXG01000309
338132
Bacteroidota
GCA
Cys
>WENV182970874
OKXG01000015
301449
Bacteroidota
CGG
Pro
>WENV182970888
OKXG01000028
144656
Bacteroidota
GTG
His
>WENV182970872
OKXG01000012
235207
Bacteroidota
CAT
Met
>WENV182971009
OKXG01001362
144596
Bacteroidota
GGC
Ala
>WENV182970938
OKXG01000121
80607
Bacteroidota
GTA
Tyr
>WENV182970990
OKXG01000547
16999
Bacteroidota
GGA
Ser
>WENV182970926
OKXG01000094
52358
Bacteroidota
TGA
Ser
>WENV182970958
OKXG01000218
52358
Bacteroidota
TGA
Ser
>WENV182971099
OKXG01007777
154643
Bacteroidota
CAT
Met
>WENV182970902
OKXG01000049
144590
Bacteroidota
GTT
Asn
>WENV182970924
OKXG01000090
95559
Bacteroidota
TAG
Leu
>WENV182970890
OKXG01000036
419272
Bacteroidota
CTG
Gln
>WENV182970922
OKXG01000077
144655
Bacteroidota
GGC
Ala
>WENV182970892
OKXG01000036
139743
Bacteroidota
GGG
Pro
>WENV182970995
OKXG01000748
425638
Bacteroidota
CTG
Gln
>WENV182970889
OKXG01000028
16224
Bacteroidota
GGA
Ser
>WENV182970891
OKXG01000036
16220
Bacteroidota
GGA
Ser
>WENV182970875
OKXG01000016
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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