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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182971215
OKXH01000148
235097
Bacteroidota
TTT
Lys
>WENV182971228
OKXH01000322
235097
Bacteroidota
TTT
Lys
>WENV182971305
OKXH01004053
235102
Bacteroidota
CGT
Thr
>WENV182971206
OKXH01000107
338155
Bacteroidota
CTC
Glu
>WENV182971335
OKXH01009115
338486
Bacteroidota
CAT
Met
>WENV182971184
OKXH01000020
48053
Bacteroidota
TGA
Ser
>WENV182971237
OKXH01000413
415410
Bacteroidota
TTG
Gln
>WENV182971193
OKXH01000041
338124
Bacteroidota
CCG
Arg
>WENV182971214
OKXH01000146
338132
Bacteroidota
GCA
Cys
>WENV182971240
OKXH01000525
144933
Bacteroidota
TCT
Arg
>WENV182971185
OKXH01000020
144656
Bacteroidota
GTG
His
>WENV182971188
OKXH01000028
235207
Bacteroidota
CAT
Met
>WENV182971344
OKXH01013170
144659
Bacteroidota
GTG
His
>WENV182971303
OKXH01003688
144596
Bacteroidota
GGC
Ala
>WENV182971220
OKXH01000189
80607
Bacteroidota
GTA
Tyr
>WENV182971310
OKXH01004472
80614
Bacteroidota
>WENV182971232
OKXH01000351
95559
Bacteroidota
TAG
Leu
>WENV182971236
OKXH01000411
419272
Bacteroidota
CTG
Gln
>WENV182971239
OKXH01000477
144655
Bacteroidota
GGC
Ala
>WENV182971175
OKXH01000003
44852
Bacteroidota
TAA
Leu
>WENV182971337
OKXH01009962
411550
Bacteroidota
CTG
Gln
>WENV182971205
OKXH01000107
23696
Bacteroidota
GCT
Ser
>WENV182971196
OKXH01000046
16224
Bacteroidota
GGA
Ser
>WENV182971180
OKXH01000012
16220
Bacteroidota
GGA
Ser
>WENV182971173
OKXH01000003
338125
Bacteroidota
CCT
Arg
>WENV182971197
OKXH01000052
338125
Bacteroidota
CCT
Arg
>WENV182971340
OKXH01011586
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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