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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182971439
OKXI01000104
235097
Bacteroidota
TTT
Lys
>WENV182971579
OKXI01000601
235097
Bacteroidota
TTT
Lys
>WENV182971534
OKXI01000402
235102
Bacteroidota
CGT
Thr
>WENV182972893
OKXI01107491
235102
Bacteroidota
CGT
Thr
>WENV182971414
OKXI01000056
267954
Bacteroidota
GCC
Gly
>WENV182971415
OKXI01000056
267954
Bacteroidota
GCC
Gly
>WENV182971416
OKXI01000056
267954
Bacteroidota
GCC
Gly
>WENV182972189
OKXI01017388
267954
Bacteroidota
GCC
Gly
>WENV182972190
OKXI01017388
267954
Bacteroidota
GCC
Gly
>WENV182972193
OKXI01017557
267954
Bacteroidota
GCC
Gly
>WENV182971636
OKXI01000997
243025
Bacteroidota
CAT
Met
>WENV182972862
OKXI01100078
126966
Bacteroidota
TAC
Val
>WENV182971428
OKXI01000083
343138
Bacteroidota
CCT
Arg
>WENV182971702
OKXI01001445
343138
Bacteroidota
CCT
Arg
>WENV182972110
OKXI01012318
338486
Bacteroidota
CAT
Met
>WENV182972539
OKXI01051711
59689
Bacteroidota
CAG
Leu
>WENV182971421
OKXI01000062
436206
Bacteroidota
TTG
Gln
>WENV182972179
OKXI01016534
20893
Bacteroidota
GGA
Ser
>WENV182972771
OKXI01085837
20893
Bacteroidota
GGA
Ser
>WENV182971368
OKXI01000013
155123
Bacteroidota
GTT
Asn
>WENV182972744
OKXI01081365
155123
Bacteroidota
GTT
Asn
>WENV182972745
OKXI01081365
155123
Bacteroidota
GTT
Asn
>WENV182972794
OKXI01089364
344692
Bacteroidota
GGT
Thr
>WENV182972205
OKXI01018964
145504
Bacteroidota
TGT
Thr
>WENV182971413
OKXI01000053
338124
Bacteroidota
CCG
Arg
>WENV182972155
OKXI01014894
235203
Bacteroidota
TTT
Lys
>WENV182972595
OKXI01060385
235203
Bacteroidota
TTT
Lys
>WENV182971512
OKXI01000336
238121
Bacteroidota
CTT
Lys
>WENV182971641
OKXI01001081
126641
Bacteroidota
TAC
Val
>WENV182971642
OKXI01001081
126641
Bacteroidota
TAC
Val
>WENV182972521
OKXI01048917
126641
Bacteroidota
TAC
Val
>WENV182972523
OKXI01049304
126641
Bacteroidota
TAC
Val
>WENV182972802
OKXI01091375
126641
Bacteroidota
TAC
Val
>WENV182971507
OKXI01000333
338132
Bacteroidota
GCA
Cys
>WENV182972090
OKXI01011084
338132
Bacteroidota
GCA
Cys
>WENV182972127
OKXI01013105
338132
Bacteroidota
GCA
Cys
>WENV182972271
OKXI01023568
338132
Bacteroidota
GCA
Cys
>WENV182971456
OKXI01000153
193809
Bacteroidota
CAT
Met
>WENV182972310
OKXI01026689
235165
Bacteroidota
CCA
Trp
>WENV182971618
OKXI01000859
280660
Bacteroidota
CCA
Trp
>WENV182971483
OKXI01000243
301449
Bacteroidota
CGG
Pro
>WENV182971581
OKXI01000616
301449
Bacteroidota
CGG
Pro
>WENV182972130
OKXI01013207
301449
Bacteroidota
CGG
Pro
>WENV182972222
OKXI01020069
303954
Bacteroidota
GCC
Gly
>WENV182972223
OKXI01020069
303954
Bacteroidota
GCC
Gly
>WENV182971411
OKXI01000051
144656
Bacteroidota
GTG
His
>WENV182971441
OKXI01000112
235207
Bacteroidota
CAT
Met
>WENV182972741
OKXI01080544
235207
Bacteroidota
CAT
Met
>WENV182971407
OKXI01000047
143169
Bacteroidota
GGG
Pro
>WENV182971569
OKXI01000519
143169
Bacteroidota
GGG
Pro
>WENV182972171
OKXI01016155
143169
Bacteroidota
GGG
Pro
>WENV182972848
OKXI01097620
235180
Bacteroidota
CCA
Trp
>WENV182971382
OKXI01000018
80607
Bacteroidota
GTA
Tyr
>WENV182971396
OKXI01000027
80607
Bacteroidota
GTA
Tyr
>WENV182972066
OKXI01010110
80607
Bacteroidota
GTA
Tyr
>WENV182972134
OKXI01013387
80607
Bacteroidota
GTA
Tyr
>WENV182971653
OKXI01001113
113604
Bacteroidota
>WENV182971656
OKXI01001113
113604
Bacteroidota
>WENV182972532
OKXI01050787
80614
Bacteroidota
>WENV182971650
OKXI01001106
154643
Bacteroidota
CAT
Met
>WENV182971393
OKXI01000027
144590
Bacteroidota
GTT
Asn
>WENV182971394
OKXI01000027
144590
Bacteroidota
GTT
Asn
>WENV182971437
OKXI01000099
95559
Bacteroidota
TAG
Leu
>WENV182972542
OKXI01052222
95559
Bacteroidota
TAG
Leu
>WENV182971425
OKXI01000071
144655
Bacteroidota
GGC
Ala
>WENV182971614
OKXI01000827
144655
Bacteroidota
GGC
Ala
>WENV182972020
OKXI01008329
144655
Bacteroidota
GGC
Ala
>WENV182972454
OKXI01039381
144639
Bacteroidota
GGC
Ala
>WENV182971384
OKXI01000019
263771
Bacteroidota
CTT
Lys
>WENV182972334
OKXI01029512
151121
Bacteroidota
CAT
Met
>WENV182972153
OKXI01014799
139743
Bacteroidota
GGG
Pro
>WENV182971481
OKXI01000232
44852
Bacteroidota
TAA
Leu
>WENV182972858
OKXI01098688
147439
Bacteroidota
TCT
Arg
>WENV182972363
OKXI01031687
150485
Bacteroidota
GTT
Asn
>WENV182972364
OKXI01031687
150485
Bacteroidota
GTT
Asn
>WENV182972552
OKXI01052778
150485
Bacteroidota
GTT
Asn
>WENV182972553
OKXI01052778
150485
Bacteroidota
GTT
Asn
>WENV182972383
OKXI01032966
338165
Bacteroidota
GGT
Thr
>WENV182971568
OKXI01000509
425638
Bacteroidota
CTG
Gln
>WENV182972219
OKXI01019860
425638
Bacteroidota
CTG
Gln
>WENV182972519
OKXI01048631
425638
Bacteroidota
CTG
Gln
>WENV182972838
OKXI01096622
425638
Bacteroidota
CTG
Gln
>WENV182972099
OKXI01011226
19317
Bacteroidota
GGA
Ser
>WENV182971478
OKXI01000227
94703
Bacteroidota
GTA
Tyr
>WENV182971547
OKXI01000460
94703
Bacteroidota
GTA
Tyr
>WENV182971365
OKXI01000013
353927
Bacteroidota
TTC
Glu
>WENV182971366
OKXI01000013
353927
Bacteroidota
TTC
Glu
>WENV182971955
OKXI01005880
353927
Bacteroidota
TTC
Glu
>WENV182972665
OKXI01069021
353927
Bacteroidota
TTC
Glu
>WENV182972926
OKXI01111895
353927
Bacteroidota
TTC
Glu
>WENV182972338
OKXI01030209
185921
Bacteroidota
GTC
Asp
>WENV182972231
OKXI01020627
23696
Bacteroidota
GCT
Ser
>WENV182971556
OKXI01000483
414426
Bacteroidota
CTG
Gln
>WENV182971429
OKXI01000084
56823
Bacteroidota
TGA
Ser
>WENV182971524
OKXI01000393
56823
Bacteroidota
TGA
Ser
>WENV182972008
OKXI01007810
56823
Bacteroidota
TGA
Ser
>WENV182972491
OKXI01043320
56823
Bacteroidota
TGA
Ser
>WENV182972705
OKXI01073544
56823
Bacteroidota
TGA
Ser
>WENV182971412
OKXI01000051
16224
Bacteroidota
GGA
Ser
>WENV182971479
OKXI01000228
16220
Bacteroidota
GGA
Ser
>WENV182971469
OKXI01000208
338125
Bacteroidota
CCT
Arg
>WENV182972185
OKXI01016962
338125
Bacteroidota
CCT
Arg
>WENV182972697
OKXI01072468
235129
Bacteroidota
GCC
Gly
>WENV182972699
OKXI01072468
235129
Bacteroidota
GCC
Gly
>WENV182972587
OKXI01059482
313363
Bacteroidota
GAA
Phe
>WENV182971717
OKXI01001597
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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