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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182973174
OKXK01000007
235097
Bacteroidota
TTT
Lys
>WENV182973320
OKXK01000932
235102
Bacteroidota
CGT
Thr
>WENV182973367
OKXK01005018
144657
Bacteroidota
CGG
Pro
>WENV182973169
OKXK01000002
338155
Bacteroidota
CTC
Glu
>WENV182973371
OKXK01005914
343138
Bacteroidota
CCT
Arg
>WENV182973355
OKXK01003468
58715
Bacteroidota
GAG
Leu
>WENV182973325
OKXK01001001
338486
Bacteroidota
CAT
Met
>WENV182973331
OKXK01001361
411543
Bacteroidota
CTG
Gln
>WENV182973322
OKXK01000946
59689
Bacteroidota
CAG
Leu
>WENV182973180
OKXK01000024
436206
Bacteroidota
TTG
Gln
>WENV182973205
OKXK01000062
436206
Bacteroidota
TTG
Gln
>WENV182973326
OKXK01001015
20893
Bacteroidota
GGA
Ser
>WENV182973223
OKXK01000121
338124
Bacteroidota
CCG
Arg
>WENV182973338
OKXK01002211
235203
Bacteroidota
TTT
Lys
>WENV182973351
OKXK01003267
238121
Bacteroidota
CTT
Lys
>WENV182973218
OKXK01000105
338132
Bacteroidota
GCA
Cys
>WENV182973353
OKXK01003395
338132
Bacteroidota
GCA
Cys
>WENV182973394
OKXK01008655
144688
Bacteroidota
CAT
Met
>WENV182973357
OKXK01004095
45423
Bacteroidota
TGA
Ser
>WENV182973290
OKXK01000440
193809
Bacteroidota
CAT
Met
>WENV182973309
OKXK01000677
58714
Bacteroidota
CAA
Leu
>WENV182973215
OKXK01000102
144656
Bacteroidota
GTG
His
>WENV182973197
OKXK01000041
235207
Bacteroidota
CAT
Met
>WENV182973372
OKXK01005986
235207
Bacteroidota
CAT
Met
>WENV182973172
OKXK01000006
143169
Bacteroidota
GGG
Pro
>WENV182973173
OKXK01000007
143169
Bacteroidota
GGG
Pro
>WENV182973299
OKXK01000486
144659
Bacteroidota
GTG
His
>WENV182973300
OKXK01000486
144659
Bacteroidota
GTG
His
>WENV182973330
OKXK01001313
235180
Bacteroidota
CCA
Trp
>WENV182973177
OKXK01000009
144596
Bacteroidota
GGC
Ala
>WENV182973240
OKXK01000150
80607
Bacteroidota
GTA
Tyr
>WENV182973248
OKXK01000171
80607
Bacteroidota
GTA
Tyr
>WENV182973336
OKXK01001704
80614
Bacteroidota
>WENV182973199
OKXK01000045
95559
Bacteroidota
TAG
Leu
>WENV182973198
OKXK01000043
144655
Bacteroidota
GGC
Ala
>WENV182973399
OKXK01009440
338164
Bacteroidota
TTC
Glu
>WENV182973306
OKXK01000602
95875
Bacteroidota
TAG
Leu
>WENV182973342
OKXK01002637
338314
Bacteroidota
CCT
Arg
>WENV182973395
OKXK01008839
240012
Bacteroidota
CCC
Gly
>WENV182973192
OKXK01000038
44852
Bacteroidota
TAA
Leu
>WENV182973319
OKXK01000894
147439
Bacteroidota
TCT
Arg
>WENV182973210
OKXK01000083
19528
Bacteroidota
GGA
Ser
>WENV182973243
OKXK01000154
425638
Bacteroidota
CTG
Gln
>WENV182973247
OKXK01000169
425638
Bacteroidota
CTG
Gln
>WENV182973288
OKXK01000439
94703
Bacteroidota
GTA
Tyr
>WENV182973168
OKXK01000002
23696
Bacteroidota
GCT
Ser
>WENV182973224
OKXK01000123
56823
Bacteroidota
TGA
Ser
>WENV182973268
OKXK01000255
56823
Bacteroidota
TGA
Ser
>WENV182973216
OKXK01000102
16224
Bacteroidota
GGA
Ser
>WENV182973176
OKXK01000007
16220
Bacteroidota
GGA
Ser
>WENV182973201
OKXK01000053
338125
Bacteroidota
CCT
Arg
>WENV182973217
OKXK01000103
338125
Bacteroidota
CCT
Arg
>WENV182973321
OKXK01000946
235129
Bacteroidota
GCC
Gly
>WENV182973377
OKXK01006478
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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