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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182974083
OKXO01000502
24650
Bacillota
TAA
Leu
>WENV182974165
OKXO01003757
243647
Bacillota
TTT
Lys
>WENV182974194
OKXO01009643
235137
Bacillota
TGC
Ala
>WENV182974166
OKXO01003757
391536
Bacillota
TTC
Glu
>WENV182974132
OKXO01001532
429429
Bacillota
CCA
Trp
>WENV182974065
OKXO01000245
16834
Bacillota
GCT
Ser
>WENV182974107
OKXO01000864
114002
Bacillota
CAA
Leu
>WENV182974167
OKXO01003757
243612
Bacillota
TAC
Val
>WENV182974174
OKXO01004594
147135
Bacillota
ACG
Arg
>WENV182974169
OKXO01004035
313164
Bacillota
TTT
Lys
>WENV182974120
OKXO01001222
18852
Bacillota
GCT
Ser
>WENV182974099
OKXO01000690
194150
Bacillota
TGG
Pro
>WENV182974103
OKXO01000837
235197
Bacillota
GTC
Asp
>WENV182974115
OKXO01001003
368876
Bacillota
GCC
Gly
>WENV182974127
OKXO01001504
147674
Bacillota
TCT
Arg
>WENV182974163
OKXO01003757
243613
Bacillota
GTG
His
>WENV182974097
OKXO01000672
152491
Bacillota
CAT
Met
>WENV182974093
OKXO01000672
273029
Bacillota
TGT
Thr
>WENV182974096
OKXO01000672
281472
Bacillota
GGT
Thr
>WENV182974101
OKXO01000690
178024
Bacillota
TCT
Arg
>WENV182974168
OKXO01003881
413657
Bacillota
CCC
Gly
>WENV182974164
OKXO01003757
343027
Bacillota
TTG
Gln
>WENV182974161
OKXO01003378
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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