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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182978004
OKYG01000268
196621
Bacillota
GTC
Asp
>WENV182978044
OKYG01000999
196621
Bacillota
GTC
Asp
>WENV182978016
OKYG01000343
144612
Bacillota
TCT
Arg
>WENV182978082
OKYG01004236
267556
Bacillota
TAC
Val
>WENV182977992
OKYG01000170
235098
Bacillota
GAC
Val
>WENV182977976
OKYG01000063
44854
Bacillota
TGA
Ser
>WENV182978002
OKYG01000268
304022
Bacillota
GCC
Gly
>WENV182978112
OKYG01008745
246023
Bacillota
TGC
Ala
>WENV182978123
OKYG01009403
162003
Bacillota
GTC
Asp
>WENV182978065
OKYG01002222
235294
Bacillota
TGC
Ala
>WENV182978147
OKYG01012727
144668
Bacillota
GTC
Asp
>WENV182978083
OKYG01004236
41154
Bacillota
TAA
Leu
>WENV182977973
OKYG01000061
11034
Bacillota
GGA
Ser
>WENV182978003
OKYG01000268
235117
Bacillota
TAC
Val
>WENV182978005
OKYG01000268
235079
Bacillota
GAA
Phe
>WENV182977957
OKYG01000003
338149
Bacillota
CTC
Glu
>WENV182978145
OKYG01012537
144766
Bacillota
CAT
Met
>WENV182977964
OKYG01000015
245298
Bacillota
CGG
Pro
>WENV182978124
OKYG01009403
380750
Bacillota
TGT
Thr
>WENV182978119
OKYG01009403
287000
Bacillota
GTT
Asn
>WENV182978081
OKYG01004236
162445
Bacillota
CAT
Met
>WENV182977963
OKYG01000015
411547
Bacillota
CTG
Gln
>WENV182977965
OKYG01000020
411547
Bacillota
CTG
Gln
>WENV182977977
OKYG01000063
4624
Bacillota
GCT
Ser
>WENV182978042
OKYG01000910
235095
Bacillota
GGT
Thr
>WENV182978045
OKYG01000999
235095
Bacillota
GGT
Thr
>WENV182978026
OKYG01000471
411549
Bacillota
TTG
Gln
>WENV182978072
OKYG01002674
148188
Bacillota
CCG
Arg
>WENV182978034
OKYG01000597
235124
Bacillota
TGG
Pro
>WENV182977995
OKYG01000197
338129
Bacillota
TGT
Thr
>WENV182977988
OKYG01000103
144583
Bacillota
ACG
Arg
>WENV182978043
OKYG01000999
235171
Bacillota
CCA
Trp
>WENV182977958
OKYG01000003
144621
Bacillota
GTT
Asn
>WENV182977974
OKYG01000062
144621
Bacillota
GTT
Asn
>WENV182977972
OKYG01000058
58712
Bacillota
CAG
Leu
>WENV182978013
OKYG01000322
58712
Bacillota
CAG
Leu
>WENV182978035
OKYG01000624
245296
Bacillota
CCC
Gly
>WENV182978070
OKYG01002623
272992
Bacillota
CTT
Lys
>WENV182978071
OKYG01002657
144594
Bacillota
CAC
Val
>WENV182978120
OKYG01009403
338207
Bacillota
TTC
Glu
>WENV182978022
OKYG01000369
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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