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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182980184
OKYP01005460
196621
Bacillota
GTC
Asp
>WENV182980289
OKYP01026885
202812
Bacillota
CAT
Met
>WENV182980073
OKYP01000850
309417
Bacillota
GGC
Ala
>WENV182980094
OKYP01001066
309417
Bacillota
GGC
Ala
>WENV182979949
OKYP01000042
144612
Bacillota
TCT
Arg
>WENV182980036
OKYP01000334
235098
Bacillota
GAC
Val
>WENV182980090
OKYP01001058
23769
Bacillota
TAA
Leu
>WENV182980077
OKYP01000937
44854
Bacillota
TGA
Ser
>WENV182980208
OKYP01008499
44854
Bacillota
TGA
Ser
>WENV182980182
OKYP01005460
304022
Bacillota
GCC
Gly
>WENV182980278
OKYP01021835
246023
Bacillota
TGC
Ala
>WENV182980148
OKYP01002707
307003
Bacillota
TGC
Ala
>WENV182979986
OKYP01000124
59312
Bacillota
CAG
Leu
>WENV182979964
OKYP01000065
338147
Bacillota
CTC
Glu
>WENV182980011
OKYP01000260
338147
Bacillota
CTC
Glu
>WENV182980010
OKYP01000259
340802
Bacillota
TTG
Gln
>WENV182980052
OKYP01000470
235114
Bacillota
TTT
Lys
>WENV182980264
OKYP01017967
341763
Bacillota
CTC
Glu
>WENV182980115
OKYP01001896
429429
Bacillota
CCA
Trp
>WENV182980048
OKYP01000438
313454
Bacillota
GAA
Phe
>WENV182979985
OKYP01000124
44859
Bacillota
AAG
Leu
>WENV182980039
OKYP01000349
11034
Bacillota
GGA
Ser
>WENV182980040
OKYP01000349
11034
Bacillota
GGA
Ser
>WENV182980183
OKYP01005460
235117
Bacillota
TAC
Val
>WENV182980071
OKYP01000833
245298
Bacillota
CGG
Pro
>WENV182980287
OKYP01026610
413152
Bacillota
TCC
Gly
>WENV182979937
OKYP01000029
173810
Bacillota
CAT
Met
>WENV182980083
OKYP01001001
162445
Bacillota
CAT
Met
>WENV182980277
OKYP01021835
201704
Bacillota
GAT
Ile
>WENV182979907
OKYP01000004
152492
Bacillota
GGG
Pro
>WENV182980169
OKYP01004046
152492
Bacillota
GGG
Pro
>WENV182980017
OKYP01000294
144610
Bacillota
GTG
His
>WENV182979962
OKYP01000064
411547
Bacillota
CTG
Gln
>WENV182980070
OKYP01000833
411547
Bacillota
CTG
Gln
>WENV182979930
OKYP01000016
147684
Bacillota
ACG
Arg
>WENV182980088
OKYP01001054
235095
Bacillota
GGT
Thr
>WENV182980143
OKYP01002628
235095
Bacillota
GGT
Thr
>WENV182979977
OKYP01000087
152151
Bacillota
TCT
Arg
>WENV182980012
OKYP01000277
411549
Bacillota
TTG
Gln
>WENV182979972
OKYP01000084
235142
Bacillota
CTT
Lys
>WENV182980087
OKYP01001048
148188
Bacillota
CCG
Arg
>WENV182980093
OKYP01001066
80612
Bacillota
GTA
Tyr
>WENV182979939
OKYP01000030
235124
Bacillota
TGG
Pro
>WENV182979953
OKYP01000051
338129
Bacillota
TGT
Thr
>WENV182979980
OKYP01000101
144583
Bacillota
ACG
Arg
>WENV182980008
OKYP01000259
144672
Bacillota
TCT
Arg
>WENV182980236
OKYP01012546
235171
Bacillota
CCA
Trp
>WENV182980003
OKYP01000243
144621
Bacillota
GTT
Asn
>WENV182980051
OKYP01000470
235113
Bacillota
GAA
Phe
>WENV182980092
OKYP01001066
58712
Bacillota
CAG
Leu
>WENV182980105
OKYP01001285
245296
Bacillota
CCC
Gly
>WENV182980137
OKYP01002428
272992
Bacillota
CTT
Lys
>WENV182980098
OKYP01001081
157635
Bacillota
TCT
Arg
>WENV182979965
OKYP01000069
144594
Bacillota
CAC
Val
>WENV182980047
OKYP01000419
144594
Bacillota
CAC
Val
>WENV182979963
OKYP01000065
95563
Bacillota
GTA
Tyr
>WENV182980043
OKYP01000375
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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