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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182980355
OKYQ01000292
235102
Bacteroidota
CGT
Thr
>WENV182980418
OKYQ01004218
144657
Bacteroidota
CGG
Pro
>WENV182980410
OKYQ01002764
338155
Bacteroidota
CTC
Glu
>WENV182980422
OKYQ01004442
95618
Bacteroidota
TAG
Leu
>WENV182980428
OKYQ01004864
338486
Bacteroidota
CAT
Met
>WENV182980409
OKYQ01002732
59689
Bacteroidota
CAG
Leu
>WENV182980339
OKYQ01000163
436206
Bacteroidota
TTG
Gln
>WENV182980431
OKYQ01005073
436206
Bacteroidota
TTG
Gln
>WENV182980305
OKYQ01000005
338124
Bacteroidota
CCG
Arg
>WENV182980443
OKYQ01006683
126641
Bacteroidota
TAC
Val
>WENV182980344
OKYQ01000195
338132
Bacteroidota
GCA
Cys
>WENV182980416
OKYQ01003398
181746
Bacteroidota
GGC
Ala
>WENV182980411
OKYQ01002857
58714
Bacteroidota
CAA
Leu
>WENV182980381
OKYQ01000507
301449
Bacteroidota
CGG
Pro
>WENV182980340
OKYQ01000165
144656
Bacteroidota
GTG
His
>WENV182980389
OKYQ01000673
235207
Bacteroidota
CAT
Met
>WENV182980312
OKYQ01000016
235207
Bacteroidota
CAT
Met
>WENV182980436
OKYQ01006037
144659
Bacteroidota
GTG
His
>WENV182980351
OKYQ01000233
144590
Bacteroidota
GTT
Asn
>WENV182980352
OKYQ01000233
144590
Bacteroidota
GTT
Asn
>WENV182980332
OKYQ01000110
95559
Bacteroidota
TAG
Leu
>WENV182980331
OKYQ01000101
419272
Bacteroidota
CTG
Gln
>WENV182980384
OKYQ01000567
144655
Bacteroidota
GGC
Ala
>WENV182980433
OKYQ01005473
338164
Bacteroidota
TTC
Glu
>WENV182980432
OKYQ01005195
95875
Bacteroidota
TAG
Leu
>WENV182980506
OKYQ01015733
139743
Bacteroidota
GGG
Pro
>WENV182980315
OKYQ01000022
44852
Bacteroidota
TAA
Leu
>WENV182980498
OKYQ01014882
147439
Bacteroidota
TCT
Arg
>WENV182980448
OKYQ01007342
411550
Bacteroidota
CTG
Gln
>WENV182980311
OKYQ01000015
425638
Bacteroidota
CTG
Gln
>WENV182980399
OKYQ01001343
185921
Bacteroidota
GTC
Asp
>WENV182980406
OKYQ01002168
139062
Bacteroidota
TGG
Pro
>WENV182980387
OKYQ01000670
55270
Bacteroidota
TGA
Ser
>WENV182980390
OKYQ01000755
16224
Bacteroidota
GGA
Ser
>WENV182980328
OKYQ01000077
16220
Bacteroidota
GGA
Ser
>WENV182980425
OKYQ01004569
338125
Bacteroidota
CCT
Arg
>WENV182980438
OKYQ01006324
235129
Bacteroidota
GCC
Gly
>WENV182980407
OKYQ01002192
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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