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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182990299
OLAM01000105
235097
Bacteroidota
TTT
Lys
>WENV182990355
OLAM01000977
235097
Bacteroidota
TTT
Lys
>WENV182990388
OLAM01002280
235102
Bacteroidota
CGT
Thr
>WENV182990487
OLAM01011797
243025
Bacteroidota
CAT
Met
>WENV182990450
OLAM01007128
338155
Bacteroidota
CTC
Glu
>WENV182990277
OLAM01000034
415410
Bacteroidota
TTG
Gln
>WENV182990397
OLAM01002849
344692
Bacteroidota
GGT
Thr
>WENV182990490
OLAM01012208
338124
Bacteroidota
CCG
Arg
>WENV182990288
OLAM01000052
338132
Bacteroidota
GCA
Cys
>WENV182990455
OLAM01007516
338132
Bacteroidota
GCA
Cys
>WENV182990458
OLAM01008187
144933
Bacteroidota
TCT
Arg
>WENV182990308
OLAM01000150
235207
Bacteroidota
CAT
Met
>WENV182990516
OLAM01015779
144596
Bacteroidota
GGC
Ala
>WENV182990324
OLAM01000357
419272
Bacteroidota
CTG
Gln
>WENV182990428
OLAM01004991
144655
Bacteroidota
GGC
Ala
>WENV182990379
OLAM01001843
44852
Bacteroidota
TAA
Leu
>WENV182990302
OLAM01000120
132360
Bacteroidota
GGG
Pro
>WENV182990350
OLAM01000749
353927
Bacteroidota
TTC
Glu
>WENV182990449
OLAM01007128
23696
Bacteroidota
GCT
Ser
>WENV182990529
OLAM01019524
414426
Bacteroidota
CTG
Gln
>WENV182990316
OLAM01000179
16224
Bacteroidota
GGA
Ser
>WENV182990474
OLAM01010565
151960
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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