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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182991103
OLAO01009471
235102
Bacteroidota
CGT
Thr
>WENV182990983
OLAO01001196
415410
Bacteroidota
TTG
Gln
>WENV182991055
OLAO01004972
136244
Bacteroidota
TAC
Val
>WENV182991119
OLAO01011679
338124
Bacteroidota
CCG
Arg
>WENV182991021
OLAO01002759
338132
Bacteroidota
GCA
Cys
>WENV182991062
OLAO01005333
193809
Bacteroidota
CAT
Met
>WENV182991043
OLAO01004124
144656
Bacteroidota
GTG
His
>WENV182991051
OLAO01004508
235207
Bacteroidota
CAT
Met
>WENV182990958
OLAO01000660
80607
Bacteroidota
GTA
Tyr
>WENV182990978
OLAO01001069
113604
Bacteroidota
>WENV182990982
OLAO01001160
52358
Bacteroidota
TGA
Ser
>WENV182991134
OLAO01014958
154643
Bacteroidota
CAT
Met
>WENV182990998
OLAO01001562
419272
Bacteroidota
CTG
Gln
>WENV182991005
OLAO01001873
44852
Bacteroidota
TAA
Leu
>WENV182991139
OLAO01015693
132360
Bacteroidota
GGG
Pro
>WENV182991038
OLAO01003674
19317
Bacteroidota
GGA
Ser
>WENV182991025
OLAO01002797
16224
Bacteroidota
GGA
Ser
>WENV182990987
OLAO01001338
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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