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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182991480
OLAP01024651
235153
Actinomycetota
CCT
Arg
>WENV182991428
OLAP01013811
144589
Actinomycetota
ACG
Arg
>WENV182991476
OLAP01023633
245301
Actinomycetota
GCC
Gly
>WENV182991466
OLAP01022739
411601
Actinomycetota
CCC
Gly
>WENV182991479
OLAP01024533
23370
Actinomycetota
GCT
Ser
>WENV182991427
OLAP01013611
162208
Actinomycetota
TAC
Val
>WENV182991458
OLAP01020173
235101
Actinomycetota
TTT
Lys
>WENV182991454
OLAP01019659
44942
Actinomycetota
TGA
Ser
>WENV182991489
OLAP01029104
98279
Actinomycetota
GTA
Tyr
>WENV182991440
OLAP01016470
235148
Actinomycetota
GTT
Asn
>WENV182991484
OLAP01025854
338139
Actinomycetota
GTT
Asn
>WENV182991485
OLAP01026145
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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